RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-212ENST00000473961 EIF4EBP3O60516 100 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-212ENST00000473961 NCLP19338 710 aaKnown RBP6.32□□□□□ -1.4
BRCA1-212ENST00000473961 LIG3P49916 1009 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 SIK1P57059 783 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 SNAP47Q5SQN1 464 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 OGFOD2Q6N063 350 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 TRPM4Q8TD43 1214 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 DDX54Q8TDD1 881 aaKnown RBP6.32□□□□□ -1.4
BRCA1-212ENST00000473961 ASAP3Q8TDY4 903 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 NT5C1AQ9BXI3 368 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 UBE2OQ9C0C9 1292 aaKnown RBP6.32□□□□□ -1.4
BRCA1-212ENST00000473961 LNPKQ9C0E8 428 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 COPRSQ9NQ92 184 aa6.32□□□□□ -1.4
BRCA1-212ENST00000473961 GPN3Q9UHW5 284 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-212ENST00000473961 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
BRCA1-212ENST00000473961 NFE2L2Q16236 605 aa6.31□□□□□ -1.4
BRCA1-212ENST00000473961 TTBK2Q6IQ55 1244 aa6.31□□□□□ -1.4
BRCA1-212ENST00000473961 RAB44Q7Z6P3 723 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-212ENST00000473961 PBX4Q9BYU1 374 aa6.31□□□□□ -1.4
BRCA1-212ENST00000473961 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
BRCA1-212ENST00000473961 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
BRCA1-212ENST00000473961 U2SURPO15042 1029 aaKnown RBP6.3□□□□□ -1.4
BRCA1-212ENST00000473961 FBXO24O75426 580 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 TGFB1P01137 390 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 C8AP07357 584 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 EIF2AK2P19525 551 aaKnown RBP6.3□□□□□ -1.4
BRCA1-212ENST00000473961 SPINK2P20155 84 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 LMNB2Q03252 620 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 MAP3K11Q16584 847 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 ZNF296Q8WUU4 475 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-212ENST00000473961 CPLX3Q8WVH0 158 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 BSNDQ8WZ55 320 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 OSBPL2Q9H1P3 480 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 ZNF576Q9H609 170 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 JPH1Q9HDC5 661 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-212ENST00000473961 TMEM39AQ9NV64 488 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 ADAMTS1Q9UHI8 967 aa6.3□□□□□ -1.4
BRCA1-212ENST00000473961 PTPRAP18433 802 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 GRIA4P48058 902 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 TBC1D8BQ0IIM8 1120 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 APOBRQ0VD83 1088 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 LRRC14Q15048 493 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 CCDC144BQ3MJ40 725 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 COL13A1Q5TAT6 717 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-212ENST00000473961 CCDC84Q86UT8 332 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-212ENST00000473961 DMRTC2Q8IXT2 367 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-212ENST00000473961 CACTIN-AS1Q8N1I8 211 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 PHC3Q8NDX5 983 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 RHOVQ96L33 236 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 NECAB3Q96P71 396 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-212ENST00000473961 CLEC4MQ9H2X3 399 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-212ENST00000473961 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
BRCA1-212ENST00000473961 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
BRCA1-212ENST00000473961 NASPP49321 788 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-212ENST00000473961 AFF1P51825 1210 aaKnown RBP6.28□□□□□ -1.4
BRCA1-212ENST00000473961 CABP4P57796 275 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-212ENST00000473961 AGMOQ6ZNB7 445 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 TRIM56Q9BRZ2 755 aaKnown RBP6.28□□□□□ -1.4
BRCA1-212ENST00000473961 EMILIN2Q9BXX0 1053 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 TRIM55Q9BYV6 548 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 RASSF4Q9H2L5 321 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 ZSWIM4Q9H7M6 989 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 SEC31BQ9NQW1 1179 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 ADGRE2Q9UHX3 823 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 CYP8B1Q9UNU6 501 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 EFR3BQ9Y2G0 817 aa6.28□□□□□ -1.4
BRCA1-212ENST00000473961 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 ENC1O14682 589 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 PF4P02776 101 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 CELA3AP09093 270 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 SOX9P48436 509 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 CWF19L2Q2TBE0 894 aaKnown RBP6.27□□□□□ -1.41
BRCA1-212ENST00000473961 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 PCNX4Q63HM2 1172 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 CEP135Q66GS9 1140 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 SCARA3Q6AZY7 606 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 FBXL19Q6PCT2 694 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 ELMSAN1Q6PJG2 1045 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 FAM35AQ86V20 835 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 NUDT8Q8WV74 236 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 NKD1Q969G9 470 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 MRFAP1L1Q96HT8 127 aa6.27□□□□□ -1.41
BRCA1-212ENST00000473961 F6X3S4 739 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 NFKBIEO00221 500 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 CLSTN1O94985 981 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 BPNT1O95861 308 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 ACPPP15309 386 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 NME2P22392 152 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-212ENST00000473961 FAM160A1Q05DH4 1040 aa6.26□□□□□ -1.41
BRCA1-212ENST00000473961 SPRED3Q2MJR0 410 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms