RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 TRIM17Q9Y577 477 aa19.27■□□□□ 0.68
CLIC3-201ENST00000473911 PNMA6EA0A0J9YXQ4 647 aa19.26■□□□□ 0.67
CLIC3-201ENST00000473911 A0A1B0GUL7 405 aa19.26■□□□□ 0.67
CLIC3-201ENST00000473911 MVPQ14764 893 aaKnown RBP19.26■□□□□ 0.67
CLIC3-201ENST00000473911 OTOP1Q7RTM1 612 aa19.26■□□□□ 0.67
CLIC3-201ENST00000473911 ITPRIPQ8IWB1 547 aa19.26■□□□□ 0.67
CLIC3-201ENST00000473911 NEUROD6Q96NK8 337 aa19.26■□□□□ 0.67
CLIC3-201ENST00000473911 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 POTEFA5A3E0 1075 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 ALDH1A1P00352 501 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 CRHR2Q13324 411 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 DIXDC1Q155Q3 683 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 GORABQ5T7V8 394 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 FKBP1CQ5VVH2 108 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 ZGPATQ8N5A5 531 aaKnown RBP19.25■□□□□ 0.67
CLIC3-201ENST00000473911 CD99L2Q8TCZ2 262 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 XAGE2Q96GT9 111 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 ELP3Q9H9T3 547 aa19.25■□□□□ 0.67
CLIC3-201ENST00000473911 INHBEP58166 350 aa19.24■□□□□ 0.67
CLIC3-201ENST00000473911 RASGRF1Q13972 1273 aa19.24■□□□□ 0.67
CLIC3-201ENST00000473911 FAM83AQ86UY5 434 aa19.24■□□□□ 0.67
CLIC3-201ENST00000473911 HOOK2Q96ED9 719 aa19.24■□□□□ 0.67
CLIC3-201ENST00000473911 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
CLIC3-201ENST00000473911 CSADQ9Y600 493 aa19.24■□□□□ 0.67
CLIC3-201ENST00000473911 KIAA0100Q14667 2235 aaKnown RBP19.23■□□□□ 0.67
CLIC3-201ENST00000473911 MAP3K9P80192 1104 aa19.23■□□□□ 0.67
CLIC3-201ENST00000473911 OS9Q13438 667 aaPredicted RBP19.23■□□□□ 0.67
CLIC3-201ENST00000473911 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.23■□□□□ 0.67
CLIC3-201ENST00000473911 DZIP1Q86YF9 867 aaKnown RBP19.23■□□□□ 0.67
CLIC3-201ENST00000473911 C1orf115Q9H7X2 142 aa19.23■□□□□ 0.67
CLIC3-201ENST00000473911 ABCF2Q9UG63 623 aa19.23■□□□□ 0.67
CLIC3-201ENST00000473911 CDC42EP5Q6NZY7 148 aa19.22■□□□□ 0.67
CLIC3-201ENST00000473911 OPTNQ96CV9 577 aa19.22■□□□□ 0.67
CLIC3-201ENST00000473911 MS4A4AQ96JQ5 239 aa19.22■□□□□ 0.67
CLIC3-201ENST00000473911 TESPA1A2RU30 521 aaPredicted RBP19.21■□□□□ 0.67
CLIC3-201ENST00000473911 ZBTB22O15209 634 aa19.21■□□□□ 0.67
CLIC3-201ENST00000473911 RLBP1P12271 317 aa19.21■□□□□ 0.67
CLIC3-201ENST00000473911 VGLL4Q14135 290 aa19.21■□□□□ 0.67
CLIC3-201ENST00000473911 DCAF15Q66K64 600 aa19.21■□□□□ 0.67
CLIC3-201ENST00000473911 SPTY2D1Q68D10 685 aaPredicted RBP19.21■□□□□ 0.67
CLIC3-201ENST00000473911 USP40Q9NVE5 1235 aa19.21■□□□□ 0.67
CLIC3-201ENST00000473911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.21■□□□□ 0.67
CLIC3-201ENST00000473911 PDS5AQ29RF7 1337 aaKnown RBP19.21■□□□□ 0.67
CLIC3-201ENST00000473911 ATP8B2P98198 1209 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 TCP10Q12799 353 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 SLF2Q8IX21 1173 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.2■□□□□ 0.66
CLIC3-201ENST00000473911 FAM151AQ8WW52 585 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 BRI3BPQ8WY22 251 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 WRNIP1Q96S55 665 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 PTPN22Q9Y2R2 807 aa19.2■□□□□ 0.66
CLIC3-201ENST00000473911 ZBTB7BO15156 539 aaPredicted RBP19.19■□□□□ 0.66
CLIC3-201ENST00000473911 POLA2Q14181 598 aa19.19■□□□□ 0.66
CLIC3-201ENST00000473911 RPAP1Q9BWH6 1393 aaPredicted RBP19.19■□□□□ 0.66
CLIC3-201ENST00000473911 ZSWIM8A7E2V4 1837 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
CLIC3-201ENST00000473911 NFIAQ12857 509 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 ERICH6Q7L0X2 663 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 MIGA2Q7L4E1 593 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 SSH3Q8TE77 659 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 OTUD5Q96G74 571 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 ZNF341Q9BYN7 854 aa19.18■□□□□ 0.66
CLIC3-201ENST00000473911 SP3Q02447 781 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 FAM43AQ8N2R8 423 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 SPATA5Q8NB90 893 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 PANK1Q8TE04 598 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 ERO1AQ96HE7 468 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 HMG20BQ9P0W2 317 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 MYH13Q9UKX3 1938 aa19.17■□□□□ 0.66
CLIC3-201ENST00000473911 UQCRFS1P1P0C7P4 283 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 MS4A1P11836 297 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 EN2P19622 333 aaPredicted RBP19.16■□□□□ 0.66
CLIC3-201ENST00000473911 ARID4AP29374 1257 aaPredicted RBP19.16■□□□□ 0.66
CLIC3-201ENST00000473911 GTF2A2P52657 109 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 TNNI3KQ59H18 835 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 ZKSCAN4Q969J2 545 aaPredicted RBP19.16■□□□□ 0.66
CLIC3-201ENST00000473911 EFCC1Q9HA90 598 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 FAM198AQ9UFP1 575 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 FPGT-TNNI3KV9GXZ4 949 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 GAKO14976 1311 aa19.16■□□□□ 0.66
CLIC3-201ENST00000473911 CCL15-CCL14A0A0B4J2E2 113 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 SPDYE5A6NIY4 337 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 BTDP43251 543 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 MECOMQ03112 1051 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 CCL15Q16663 113 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 PI16Q6UXB8 463 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 GPR108Q9NPR9 543 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 SNCAIPQ9Y6H5 919 aa19.15■□□□□ 0.66
CLIC3-201ENST00000473911 RBBP6Q7Z6E9 1792 aaKnown RBP19.14■□□□□ 0.66
CLIC3-201ENST00000473911 RGS3P49796 1198 aa19.14■□□□□ 0.65
CLIC3-201ENST00000473911 GSTO1P78417 241 aa19.14■□□□□ 0.65
CLIC3-201ENST00000473911 CCDC158Q5M9N0 1113 aa19.14■□□□□ 0.65
CLIC3-201ENST00000473911 TBC1D9Q6ZT07 1266 aa19.14■□□□□ 0.65
CLIC3-201ENST00000473911 ERO1BQ86YB8 467 aa19.14■□□□□ 0.65
CLIC3-201ENST00000473911 ZSCAN29Q8IWY8 852 aaPredicted RBP19.14■□□□□ 0.65
CLIC3-201ENST00000473911 ARMC5Q96C12 935 aa19.14■□□□□ 0.65
CLIC3-201ENST00000473911 FAM163AQ96GL9 167 aaPredicted RBP19.14■□□□□ 0.65
CLIC3-201ENST00000473911 RAI14Q9P0K7 980 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms