RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CCL15-CCL14A0A0B4J2E2 113 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 TRIM27P14373 513 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 HNRNPUQ00839 825 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMPD4-217ENST00000473720 TFCP2Q12800 502 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 CCL15Q16663 113 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 NOM1Q5C9Z4 860 aaKnown RBP14.82□□□□□ -0.04
SMPD4-217ENST00000473720 CCDC102BQ68D86 513 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 CDC42EP5Q6NZY7 148 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 FBXO46Q6PJ61 603 aaPredicted RBP14.82□□□□□ -0.04
SMPD4-217ENST00000473720 FAM83AQ86UY5 434 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 MIER1Q8N108 512 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 NEUROD6Q96NK8 337 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 MRIQ9BWK5 157 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 ABCF2Q9UG63 623 aa14.82□□□□□ -0.04
SMPD4-217ENST00000473720 DOCK1Q14185 1865 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 GTF2A2P52657 109 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 TAF1CQ15572 869 aaPredicted RBP14.81□□□□□ -0.04
SMPD4-217ENST00000473720 DCAF15Q66K64 600 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 ATF7IPQ6VMQ6 1270 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 HOOK2Q96ED9 719 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 MS4A4AQ96JQ5 239 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 USP40Q9NVE5 1235 aa14.81□□□□□ -0.04
SMPD4-217ENST00000473720 TNRC18O15417 2968 aaPredicted RBP14.8□□□□□ -0.04
SMPD4-217ENST00000473720 A0A1B0GUL7 405 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 NFIAQ12857 509 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 DZIP1Q86YF9 867 aaKnown RBP14.8□□□□□ -0.04
SMPD4-217ENST00000473720 BRI3BPQ8WY22 251 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 ERO1AQ96HE7 468 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 ZNF341Q9BYN7 854 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 SNCAIPQ9Y6H5 919 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
SMPD4-217ENST00000473720 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
SMPD4-217ENST00000473720 TESPA1A2RU30 521 aaPredicted RBP14.79□□□□□ -0.04
SMPD4-217ENST00000473720 ECM2O94769 699 aaPredicted RBP14.79□□□□□ -0.04
SMPD4-217ENST00000473720 GNAI2P04899 355 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 INPP5BP32019 993 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 SP3Q02447 781 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 RASGRF1Q13972 1273 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 GORABQ5T7V8 394 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 PDE4DIPQ5VU43 2346 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 FKBP1CQ5VVH2 108 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 ERO1BQ86YB8 467 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 FAM43AQ8N2R8 423 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 FAM151AQ8WW52 585 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 XAGE2Q96GT9 111 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 AKAP2Q9Y2D5 859 aa14.79□□□□□ -0.04
SMPD4-217ENST00000473720 RBBP6Q7Z6E9 1792 aaKnown RBP14.78□□□□□ -0.04
SMPD4-217ENST00000473720 RPAP1Q9BWH6 1393 aaPredicted RBP14.78□□□□□ -0.04
SMPD4-217ENST00000473720 PNMA6EA0A0J9YXQ4 647 aa14.78□□□□□ -0.04
SMPD4-217ENST00000473720 SPDYE5A6NIY4 337 aa14.78□□□□□ -0.04
SMPD4-217ENST00000473720 SEMA3EO15041 775 aa14.78□□□□□ -0.04
SMPD4-217ENST00000473720 ZKSCAN2Q63HK3 967 aa14.78□□□□□ -0.04
SMPD4-217ENST00000473720 DIEXFQ68CQ4 756 aaKnown RBP14.78□□□□□ -0.04
SMPD4-217ENST00000473720 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
SMPD4-217ENST00000473720 ZGPATQ8N5A5 531 aaKnown RBP14.78□□□□□ -0.04
SMPD4-217ENST00000473720 TMEM57Q8N5G2 664 aa14.78□□□□□ -0.04
SMPD4-217ENST00000473720 ZFYVE28Q9HCC9 887 aa14.78□□□□□ -0.04
SMPD4-217ENST00000473720 SALL1Q9NSC2 1324 aa14.77□□□□□ -0.04
SMPD4-217ENST00000473720 IRF6O14896 467 aa14.77□□□□□ -0.05
SMPD4-217ENST00000473720 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
SMPD4-217ENST00000473720 PICALMQ13492 652 aa14.77□□□□□ -0.05
SMPD4-217ENST00000473720 MVPQ14764 893 aaKnown RBP14.77□□□□□ -0.05
SMPD4-217ENST00000473720 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
SMPD4-217ENST00000473720 EFCC1Q9HA90 598 aa14.77□□□□□ -0.05
SMPD4-217ENST00000473720 FAM198AQ9UFP1 575 aa14.77□□□□□ -0.05
SMPD4-217ENST00000473720 FOCADQ5VW36 1801 aa14.77□□□□□ -0.05
SMPD4-217ENST00000473720 MAST2Q6P0Q8 1798 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 CETPP11597 493 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 RGS3P49796 1198 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 SNAPC2Q13487 334 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 MTX1Q13505 466 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 ERICH6Q7L0X2 663 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 FTSJ3Q8IY81 847 aaKnown RBP14.76□□□□□ -0.05
SMPD4-217ENST00000473720 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
SMPD4-217ENST00000473720 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 MYH1P12882 1939 aa14.76□□□□□ -0.05
SMPD4-217ENST00000473720 BTBD19C9JJ37 291 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 WDHD1O75717 1129 aaPredicted RBP14.75□□□□□ -0.05
SMPD4-217ENST00000473720 BTDP43251 543 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 CAP1Q01518 475 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 PPIL2Q13356 520 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 OS9Q13438 667 aaPredicted RBP14.75□□□□□ -0.05
SMPD4-217ENST00000473720 SPTY2D1Q68D10 685 aaPredicted RBP14.75□□□□□ -0.05
SMPD4-217ENST00000473720 TBC1D9Q6ZT07 1266 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 SLF2Q8IX21 1173 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 PTPN22Q9Y2R2 807 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 KIAA0100Q14667 2235 aaKnown RBP14.75□□□□□ -0.05
SMPD4-217ENST00000473720 CENPFP49454 3210 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 DOCK3Q8IZD9 2030 aa14.75□□□□□ -0.05
SMPD4-217ENST00000473720 SLURP2P0DP57 97 aa14.74□□□□□ -0.05
SMPD4-217ENST00000473720 MECOMQ03112 1051 aa14.74□□□□□ -0.05
SMPD4-217ENST00000473720 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
SMPD4-217ENST00000473720 MROH7-TTC4A0A0A0MT08 1334 aa14.73□□□□□ -0.05
SMPD4-217ENST00000473720 MYCP01106 439 aaPredicted RBP14.73□□□□□ -0.05
SMPD4-217ENST00000473720 PPATQ06203 517 aa14.73□□□□□ -0.05
SMPD4-217ENST00000473720 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
SMPD4-217ENST00000473720 DDX4Q9NQI0 724 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms