RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 NEFLP07196 543 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 EDN3P14138 238 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 CHRNA4P43681 627 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 GRIK4Q16099 956 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 FAM129BQ96TA1 746 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 SPOCK3Q9BQ16 436 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 MUC3BQ9H195 1237 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 AMOTL2Q9Y2J4 779 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.65
A1CF-209ENST00000473480 IVNS1ABPQ9Y6Y0 642 aa10.96□□□□□ -0.65
A1CF-209ENST00000473480 SYCP2Q9BX26 1530 aa10.95□□□□□ -0.66
A1CF-209ENST00000473480 ARHGAP23Q9P227 1491 aa10.95□□□□□ -0.66
A1CF-209ENST00000473480 FBXO11Q86XK2 927 aa10.95□□□□□ -0.66
A1CF-209ENST00000473480 TMC1Q8TDI8 760 aa10.95□□□□□ -0.66
A1CF-209ENST00000473480 LRRC59Q96AG4 307 aaKnown RBP10.95□□□□□ -0.66
A1CF-209ENST00000473480 ZFYVE28Q9HCC9 887 aa10.95□□□□□ -0.66
A1CF-209ENST00000473480 UBR1Q8IWV7 1749 aa10.95□□□□□ -0.66
A1CF-209ENST00000473480 KDM5AP29375 1690 aaKnown RBP10.95□□□□□ -0.66
A1CF-209ENST00000473480 SLIT1O75093 1534 aa10.94□□□□□ -0.66
A1CF-209ENST00000473480 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
A1CF-209ENST00000473480 FAM177BA6PVY3 158 aa10.94□□□□□ -0.66
A1CF-209ENST00000473480 PDIA4P13667 645 aaKnown RBP10.94□□□□□ -0.66
A1CF-209ENST00000473480 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
A1CF-209ENST00000473480 SRA1Q9HD15 236 aaKnown RBP10.94□□□□□ -0.66
A1CF-209ENST00000473480 DZANK1Q9NVP4 752 aa10.94□□□□□ -0.66
A1CF-209ENST00000473480 PPME1Q9Y570 386 aa10.94□□□□□ -0.66
A1CF-209ENST00000473480 DHX29Q7Z478 1369 aaKnown RBP10.93□□□□□ -0.66
A1CF-209ENST00000473480 PTPRAP18433 802 aa10.93□□□□□ -0.66
A1CF-209ENST00000473480 MAP4K3Q8IVH8 894 aa10.93□□□□□ -0.66
A1CF-209ENST00000473480 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
A1CF-209ENST00000473480 RBCK1Q9BYM8 510 aa10.93□□□□□ -0.66
A1CF-209ENST00000473480 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 C9orf172C9J069 976 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 PROCP04070 461 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 ACPPP15309 386 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 ATF3P18847 181 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 CDC27P30260 824 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 DCAF11Q8TEB1 546 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 DMRTB1Q96MA1 342 aa10.92□□□□□ -0.66
A1CF-209ENST00000473480 POP1Q99575 1024 aaKnown RBP10.92□□□□□ -0.66
A1CF-209ENST00000473480 NFKBIEO00221 500 aa10.91□□□□□ -0.66
A1CF-209ENST00000473480 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
A1CF-209ENST00000473480 NRG1Q02297 640 aaPredicted RBP10.91□□□□□ -0.66
A1CF-209ENST00000473480 R3HDM1Q15032 1099 aaKnown RBP10.91□□□□□ -0.66
A1CF-209ENST00000473480 LENG1Q96BZ8 264 aaPredicted RBP10.91□□□□□ -0.66
A1CF-209ENST00000473480 OSMRQ99650 979 aa10.91□□□□□ -0.66
A1CF-209ENST00000473480 DCTN4Q9UJW0 460 aa10.91□□□□□ -0.66
A1CF-209ENST00000473480 ATRNO75882 1429 aa10.91□□□□□ -0.66
A1CF-209ENST00000473480 DEAF1O75398 565 aaPredicted RBP10.9□□□□□ -0.66
A1CF-209ENST00000473480 SELPP16109 830 aa10.9□□□□□ -0.66
A1CF-209ENST00000473480 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
A1CF-209ENST00000473480 TMEM102Q8N9M5 508 aaPredicted RBP10.9□□□□□ -0.66
A1CF-209ENST00000473480 ZKSCAN3Q9BRR0 538 aa10.9□□□□□ -0.66
A1CF-209ENST00000473480 ADAM19Q9H013 955 aa10.9□□□□□ -0.66
A1CF-209ENST00000473480 CDC42BPAQ5VT25 1732 aa10.89□□□□□ -0.67
A1CF-209ENST00000473480 GPR182O15218 404 aa10.89□□□□□ -0.67
A1CF-209ENST00000473480 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
A1CF-209ENST00000473480 NCOA3Q9Y6Q9 1424 aa10.89□□□□□ -0.67
A1CF-209ENST00000473480 TRPA1O75762 1119 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 IGHA2P01877 340 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 GATA4P43694 442 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 SETDB1Q15047 1291 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 IGF2-ASQ6U949 168 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 ALKBH8Q96BT7 664 aaKnown RBP10.88□□□□□ -0.67
A1CF-209ENST00000473480 C19orf44Q9H6X5 657 aa10.88□□□□□ -0.67
A1CF-209ENST00000473480 PLEKHH2Q8IVE3 1493 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 LINC01387J3KSC0 135 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 DLL1O00548 723 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
A1CF-209ENST00000473480 POLR3DP05423 398 aaPredicted RBP10.87□□□□□ -0.67
A1CF-209ENST00000473480 MAPK1P28482 360 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 ORC1Q13415 861 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 PEAR1Q5VY43 1037 aaPredicted RBP10.87□□□□□ -0.67
A1CF-209ENST00000473480 FAM117BQ6P1L5 589 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 ADAMTSL4Q6UY14 1074 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 GALNT12Q8IXK2 581 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 HHIPQ96QV1 700 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 SH2B1Q9NRF2 756 aaPredicted RBP10.87□□□□□ -0.67
A1CF-209ENST00000473480 PNPLA6Q8IY17 1366 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 TMEM2Q9UHN6 1383 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
A1CF-209ENST00000473480 UNC13BO14795 1591 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 EPHA1P21709 976 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 CABP4P57796 275 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 TMC7Q7Z402 723 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 DNAJC25Q9H1X3 360 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 LATS2Q9NRM7 1088 aa10.86□□□□□ -0.67
A1CF-209ENST00000473480 PPP1R1BQ9UD71 204 aaPredicted RBP10.86□□□□□ -0.67
A1CF-209ENST00000473480 TET3O43151 1660 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 RTEL1-TNFRSF6BF6WH68 1400 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 FMN1Q68DA7 1419 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 MROH1Q8NDA8 1641 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 MBTPS1Q14703 1052 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 TXNDC11Q6PKC3 985 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
A1CF-209ENST00000473480 BHLHE41Q9C0J9 482 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms