RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 MFSD14BQ5SR56 506 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 NBPF11Q86T75 865 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 VPS37DQ86XT2 251 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 C9orf78Q9NZ63 289 aaPredicted RBP8.75□□□□□ -1.01
CKS1B-205ENST00000473344 SERPINA10Q9UK55 444 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 TTF2Q9UNY4 1162 aaKnown RBP8.75□□□□□ -1.01
CKS1B-205ENST00000473344 CSADQ9Y600 493 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 MYH3P11055 1940 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
CKS1B-205ENST00000473344 TCP10L2B9ZVM9 353 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 F6X3S4 739 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 GRM8O00222 908 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 FRAT2O75474 233 aaPredicted RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 HIBADHP31937 336 aaKnown RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 SLC9C1Q4G0N8 1177 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 ARSIQ5FYB1 569 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 TDRD3Q9H7E2 651 aaKnown RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 ZFYVE28Q9HCC9 887 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 ZNF70Q9UC06 446 aaPredicted RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 SALL2Q9Y467 1007 aaPredicted RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 ZNF646O15015 1829 aaPredicted RBP8.74□□□□□ -1.01
CKS1B-205ENST00000473344 IRS2Q9Y4H2 1338 aa8.74□□□□□ -1.01
CKS1B-205ENST00000473344 CCL15-CCL14A0A0B4J2E2 113 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
CKS1B-205ENST00000473344 VAMP4O75379 141 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 EN2P19622 333 aaPredicted RBP8.73□□□□□ -1.01
CKS1B-205ENST00000473344 GJA5P36382 358 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 GYG1P46976 350 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 GTF2A2P52657 109 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 EXOSC9Q06265 439 aaKnown RBP8.73□□□□□ -1.01
CKS1B-205ENST00000473344 UBE4AQ14139 1066 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 KIF22Q14807 665 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 TAF1CQ15572 869 aaPredicted RBP8.73□□□□□ -1.01
CKS1B-205ENST00000473344 CCL15Q16663 113 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 SLC4A8Q2Y0W8 1093 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 HABP4Q5JVS0 413 aaKnown RBP8.73□□□□□ -1.01
CKS1B-205ENST00000473344 BEND3Q5T5X7 828 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 SLC4A10Q6U841 1118 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 DZIP1LQ8IYY4 767 aaKnown RBP8.73□□□□□ -1.01
CKS1B-205ENST00000473344 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 PTPN18Q99952 460 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 FAM205AQ6ZU69 1335 aa8.73□□□□□ -1.01
CKS1B-205ENST00000473344 STK25O00506 426 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 PBX2P40425 430 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 CRKP46108 304 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 VGLL4Q14135 290 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 CAVIN4Q5BKX8 364 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 WDR63Q8IWG1 891 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 TDRD7Q8NHU6 1098 aaKnown RBP8.72□□□□□ -1.01
CKS1B-205ENST00000473344 HOOK2Q96ED9 719 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 TMEM39BQ9GZU3 492 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 TMOD2Q9NZR1 351 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 PDE4DIPQ5VU43 2346 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 AOX1Q06278 1338 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 MROH5Q6ZUA9 1318 aa8.72□□□□□ -1.01
CKS1B-205ENST00000473344 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-205ENST00000473344 CHAF1AQ13111 956 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-205ENST00000473344 EPHA10Q5JZY3 1008 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-205ENST00000473344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.71□□□□□ -1.02
CKS1B-205ENST00000473344 TBC1D22AQ8WUA7 517 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 BRI3BPQ8WY22 251 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 TEKT1Q969V4 418 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 ZNF333Q96JL9 665 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 FAM84BQ96KN1 310 aaPredicted RBP8.71□□□□□ -1.02
CKS1B-205ENST00000473344 TEPSINQ96N21 525 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 SRCIN1Q9C0H9 1055 aa8.71□□□□□ -1.02
CKS1B-205ENST00000473344 ALDH1L1O75891 902 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 CETPP11597 493 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 CCDC184Q52MB2 194 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 METTL24Q5JXM2 366 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 FAM43AQ8N2R8 423 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 WRNIP1Q96S55 665 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 MRS2Q9HD23 443 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 IQSEC3Q9UPP2 1182 aaPredicted RBP8.7□□□□□ -1.02
CKS1B-205ENST00000473344 PTCH2Q9Y6C5 1203 aa8.7□□□□□ -1.02
CKS1B-205ENST00000473344 ECM29Q5VYK3 1845 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 TLR2O60603 784 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 GNRH1P01148 92 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 CACNB3P54284 484 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 HDLBPQ00341 1268 aaKnown RBP8.69□□□□□ -1.02
CKS1B-205ENST00000473344 SNAPC2Q13487 334 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 DCAF15Q66K64 600 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 ERO1BQ86YB8 467 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 SH3TC2Q8TF17 1288 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 ZKSCAN4Q969J2 545 aaPredicted RBP8.69□□□□□ -1.02
CKS1B-205ENST00000473344 PUS3Q9BZE2 481 aaKnown RBP8.69□□□□□ -1.02
CKS1B-205ENST00000473344 ZCCHC17Q9NP64 241 aaKnown RBP8.69□□□□□ -1.02
CKS1B-205ENST00000473344 MAST3O60307 1309 aa8.69□□□□□ -1.02
CKS1B-205ENST00000473344 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
CKS1B-205ENST00000473344 PDE8BO95263 885 aa8.68□□□□□ -1.02
CKS1B-205ENST00000473344 NBPF7P0C2Y1 421 aaPredicted RBP8.68□□□□□ -1.02
CKS1B-205ENST00000473344 PRMT2P55345 433 aa8.68□□□□□ -1.02
CKS1B-205ENST00000473344 LACTBP83111 547 aaPredicted RBP8.68□□□□□ -1.02
CKS1B-205ENST00000473344 CAP1Q01518 475 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms