RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SMTNP53814 917 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 PAK2Q13177 524 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 KCTD2Q14681 263 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 NFE2Q16621 373 aaPredicted RBP7.44□□□□□ -1.22
RTF1-203ENST00000473214 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 CASC1Q6TDU7 716 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 FCHSD1Q86WN1 690 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 TRIM50Q86XT4 487 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 HOMER1Q86YM7 354 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 CRELD1Q96HD1 420 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 RSPH9Q9H1X1 276 aaPredicted RBP7.44□□□□□ -1.22
RTF1-203ENST00000473214 PPCSQ9HAB8 311 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 ASXL2Q76L83 1435 aa7.44□□□□□ -1.22
RTF1-203ENST00000473214 ABCC2Q92887 1545 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 KIF21BO75037 1637 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 A0A1W2PNR3 127 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 CCDC85CA6NKD9 419 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 DHX16O60231 1041 aaKnown RBP7.43□□□□□ -1.22
RTF1-203ENST00000473214 FAM13AO94988 1023 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 CD33P20138 364 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 CDKN1CP49918 316 aaPredicted RBP7.43□□□□□ -1.22
RTF1-203ENST00000473214 ATP1A2P50993 1020 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 SEC13P55735 322 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 EML3Q32P44 896 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 HS2ST1Q7LGA3 356 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 KIAA0907Q7Z7F0 614 aaPredicted RBP7.43□□□□□ -1.22
RTF1-203ENST00000473214 PLPP7Q8NBV4 271 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 AIDAQ96BJ3 306 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 GPRASP2Q96D09 838 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
RTF1-203ENST00000473214 DISP3Q9P2K9 1392 aa7.43□□□□□ -1.22
RTF1-203ENST00000473214 GLI2P10070 1586 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 MAP3K4Q9Y6R4 1608 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 DCDC2BA2VCK2 349 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 FAM221BA6H8Z2 402 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 LGR5O75473 907 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 FAM163BP0C2L3 166 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 CNGA1P29973 690 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 RSPO4Q2I0M5 234 aaPredicted RBP7.42□□□□□ -1.22
RTF1-203ENST00000473214 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 KSR2Q6VAB6 950 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 ARMCX6Q7L4S7 300 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 JAMLQ86YT9 394 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 CHPFQ8IZ52 775 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 TRIM11Q96F44 468 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 SLC4A9Q96Q91 983 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 ZNF408Q9H9D4 720 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 AS3MTQ9HBK9 375 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 CNTN3Q9P232 1028 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 GGT7Q9UJ14 662 aa7.42□□□□□ -1.22
RTF1-203ENST00000473214 CTDP1Q9Y5B0 961 aaPredicted RBP7.42□□□□□ -1.22
RTF1-203ENST00000473214 CUL7Q14999 1698 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 CCDC163A0A0D9SF12 145 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 ALDH1L1O75891 902 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 EPHB1P54762 984 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 LRRC41Q15345 812 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 MAP7D1Q3KQU3 841 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 GRAMD1BQ3KR37 738 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 INO80DQ53TQ3 878 aaPredicted RBP7.41□□□□□ -1.22
RTF1-203ENST00000473214 ZNF468Q5VIY5 522 aaPredicted RBP7.41□□□□□ -1.22
RTF1-203ENST00000473214 ANKS3Q6ZW76 656 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 HELQQ8TDG4 1101 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 DMRTB1Q96MA1 342 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 NUB1Q9Y5A7 615 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 ERICH3Q5RHP9 1530 aa7.41□□□□□ -1.22
RTF1-203ENST00000473214 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 DYTNA2CJ06 578 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 CDK2AP1O14519 115 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 KHNYNO15037 678 aaKnown RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 PTCD1O75127 700 aaKnown RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 FAM157BP0CG42 384 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 GNA15P30679 374 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 RASA3Q14644 834 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 NAA30Q147X3 362 aaPredicted RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 TTF1Q15361 905 aaPredicted RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 MTFR1Q15390 333 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 CC2D1AQ6P1N0 951 aaPredicted RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 C14orf80Q86SX3 495 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 TEX19Q8NA77 164 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 ZIC5Q96T25 663 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 PLVAPQ9BX97 442 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 ZNF700Q9H0M5 742 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 ZDHHC3Q9NYG2 299 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 MRPS23Q9Y3D9 190 aaKnown RBP7.4□□□□□ -1.22
RTF1-203ENST00000473214 TOP2BQ02880 1626 aa7.4□□□□□ -1.22
RTF1-203ENST00000473214 EPRSP07814 1512 aaKnown RBP7.39□□□□□ -1.23
RTF1-203ENST00000473214 TMEM229AB2RXF0 380 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 SPATA31C1P0DKV0 1188 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 TERF1P54274 439 aa7.39□□□□□ -1.23
RTF1-203ENST00000473214 PCBP4P57723 403 aaKnown RBP7.39□□□□□ -1.23
RTF1-203ENST00000473214 PTPN12Q05209 780 aaKnown RBP7.39□□□□□ -1.23
RTF1-203ENST00000473214 HLTFQ14527 1009 aaKnown RBP eCLIP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms