RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 RABEP1Q15276 862 aa22.89■■□□□ 1.25
SMARCD3-209ENST00000472988 SLF2Q8IX21 1173 aa22.89■■□□□ 1.25
SMARCD3-209ENST00000472988 SDR42E1Q8WUS8 393 aa22.89■■□□□ 1.25
SMARCD3-209ENST00000472988 DAGLAQ9Y4D2 1042 aa22.89■■□□□ 1.25
SMARCD3-209ENST00000472988 RPAP1Q9BWH6 1393 aaPredicted RBP22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 GPR75-ASB3A0A0A6YYF3 556 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 PSMD14O00487 310 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 BTDP43251 543 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 SCNN1DP51172 638 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 IFNL3Q8IZI9 196 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 JDP2Q8WYK2 163 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 MYH1P12882 1939 aa22.88■■□□□ 1.25
SMARCD3-209ENST00000472988 ZKSCAN1P17029 563 aaPredicted RBP22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 PPP4CP60510 307 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 ALX1Q15699 326 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 ADCK5Q3MIX3 580 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 RSBN1LQ6PCB5 846 aaPredicted RBP22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 ARHGAP27Q6ZUM4 889 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 CTNNA3Q9UI47 895 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 VIL1P09327 827 aaKnown RBP22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 CXCL9Q07325 125 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 TSGA10IPQ3SY00 556 aa22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 SH3RF3Q8TEJ3 882 aaPredicted RBP22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 NOL10Q9BSC4 688 aaKnown RBP22.87■■□□□ 1.25
SMARCD3-209ENST00000472988 MYO3BQ8WXR4 1341 aa22.86■■□□□ 1.25
SMARCD3-209ENST00000472988 BAG3O95817 575 aa22.86■■□□□ 1.25
SMARCD3-209ENST00000472988 CRNKL1Q9BZJ0 848 aaKnown RBP22.86■■□□□ 1.25
SMARCD3-209ENST00000472988 NAPBQ9H115 298 aa22.86■■□□□ 1.25
SMARCD3-209ENST00000472988 HAND2P61296 217 aa22.85■■□□□ 1.25
SMARCD3-209ENST00000472988 HHIPL2Q6UWX4 724 aa22.85■■□□□ 1.25
SMARCD3-209ENST00000472988 STOX1Q6ZVD7 989 aa22.85■■□□□ 1.25
SMARCD3-209ENST00000472988 TEKT1Q969V4 418 aa22.85■■□□□ 1.25
SMARCD3-209ENST00000472988 CRKP46108 304 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 TDO2P48775 406 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 IMMTQ16891 758 aaKnown RBP22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 JAKMIP1Q96N16 626 aaKnown RBP22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 GMLQ99445 158 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 UPF3BQ9BZI7 483 aaKnown RBP22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 NACAP1Q9BZK3 213 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 RHBDL3P58872 404 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 COL9A3Q14050 684 aaPredicted RBP22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 NBPF3Q9H094 633 aa22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 ZBTB12Q9Y330 459 aaPredicted RBP22.84■■□□□ 1.25
SMARCD3-209ENST00000472988 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.25
SMARCD3-209ENST00000472988 CD2BP2O95400 341 aaKnown RBP22.83■■□□□ 1.24
SMARCD3-209ENST00000472988 HDLBPQ00341 1268 aaKnown RBP22.83■■□□□ 1.24
SMARCD3-209ENST00000472988 CIAPIN1Q6FI81 312 aa22.83■■□□□ 1.24
SMARCD3-209ENST00000472988 CERS3Q8IU89 383 aa22.83■■□□□ 1.24
SMARCD3-209ENST00000472988 PCDHAC2Q9Y5I4 1007 aa22.83■■□□□ 1.24
SMARCD3-209ENST00000472988 FZD9O00144 591 aa22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 ZNF213O14771 459 aa22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 CASTP20810 708 aaKnown RBP22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 ZDHHC15Q96MV8 337 aa22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 MRIQ9BWK5 157 aa22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 TM6SF1Q9BZW5 370 aa22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 DCP1AQ9NPI6 582 aaPredicted RBP22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 ATP8A2Q9NTI2 1148 aa22.82■■□□□ 1.24
SMARCD3-209ENST00000472988 CPA1P15085 419 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 PLCG2P16885 1265 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 LMNB1P20700 586 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 KRT32Q14532 448 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 GIMAP6Q6P9H5 292 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 TBC1D10CQ8IV04 446 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 SERPINA10Q9UK55 444 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 NEK4P51957 841 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 APOBEC3HQ6NTF7 200 aaKnown RBP22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 IPO9Q96P70 1041 aaKnown RBP22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 ZSWIM6Q9HCJ5 1215 aa22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 MKRN1Q9UHC7 482 aaKnown RBP22.81■■□□□ 1.24
SMARCD3-209ENST00000472988 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 E7EWF7 191 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 USP5P45974 858 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 TEX11Q8IYF3 940 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 AGBL3Q8NEM8 1001 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 TGFBRAP1Q8WUH2 860 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 SNX21Q969T3 373 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 TBC1D2Q9BYX2 928 aa22.8■■□□□ 1.24
SMARCD3-209ENST00000472988 TNIP1Q15025 636 aa22.79■■□□□ 1.24
SMARCD3-209ENST00000472988 PSMA5P28066 241 aa22.78■■□□□ 1.24
SMARCD3-209ENST00000472988 CDC42EP5Q6NZY7 148 aa22.78■■□□□ 1.24
SMARCD3-209ENST00000472988 CTR9Q6PD62 1173 aa22.78■■□□□ 1.24
SMARCD3-209ENST00000472988 NEK1Q96PY6 1258 aa22.78■■□□□ 1.24
SMARCD3-209ENST00000472988 CYP2D7A0A087X1C5 515 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 SMIM22K7EJ46 135 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 RBM5P52756 815 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 EIF6P56537 245 aaKnown RBP22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 CTDSPL2Q05D32 466 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 PPARAQ07869 468 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 CFAP100Q494V2 611 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 RUFY3Q7L099 469 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 MAPKAPK5Q8IW41 473 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 TTC14Q96N46 770 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 FLT1P17948 1338 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 MYH8P13535 1937 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 ST18O60284 1047 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 EVX2Q03828 476 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 BLOC1S2Q6QNY1 142 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 USP40Q9NVE5 1235 aa22.77■■□□□ 1.24
SMARCD3-209ENST00000472988 ARPP21Q9UBL0 812 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms