RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 DAGLAQ9Y4D2 1042 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 GNAI2P04899 355 aa18.97■□□□□ 0.63
VTI1A-203ENST00000472892 LDHBP07195 334 aaKnown RBP18.97■□□□□ 0.63
VTI1A-203ENST00000472892 DIXDC1Q155Q3 683 aa18.97■□□□□ 0.63
VTI1A-203ENST00000472892 OTUD7BQ6GQQ9 843 aa18.97■□□□□ 0.63
VTI1A-203ENST00000472892 CLUAP1Q96AJ1 413 aa18.97■□□□□ 0.63
VTI1A-203ENST00000472892 HOOK2Q96ED9 719 aa18.97■□□□□ 0.63
VTI1A-203ENST00000472892 AKAP2Q9Y2D5 859 aa18.97■□□□□ 0.63
VTI1A-203ENST00000472892 LAMB1P07942 1786 aa18.96■□□□□ 0.63
VTI1A-203ENST00000472892 TFCP2Q12800 502 aa18.96■□□□□ 0.63
VTI1A-203ENST00000472892 DIEXFQ68CQ4 756 aaKnown RBP18.96■□□□□ 0.63
VTI1A-203ENST00000472892 CDC42EP5Q6NZY7 148 aa18.96■□□□□ 0.63
VTI1A-203ENST00000472892 FAM151AQ8WW52 585 aa18.96■□□□□ 0.63
VTI1A-203ENST00000472892 HPS5Q9UPZ3 1129 aa18.96■□□□□ 0.63
VTI1A-203ENST00000472892 CSADQ9Y600 493 aa18.96■□□□□ 0.63
VTI1A-203ENST00000472892 RPAP1Q9BWH6 1393 aaPredicted RBP18.95■□□□□ 0.62
VTI1A-203ENST00000472892 A0A1B0GUL7 405 aa18.95■□□□□ 0.62
VTI1A-203ENST00000472892 HNRNPUQ00839 825 aaKnown RBP eCLIP18.95■□□□□ 0.62
VTI1A-203ENST00000472892 ZKSCAN2Q63HK3 967 aa18.95■□□□□ 0.62
VTI1A-203ENST00000472892 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
VTI1A-203ENST00000472892 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
VTI1A-203ENST00000472892 GTF2A2P52657 109 aa18.94■□□□□ 0.62
VTI1A-203ENST00000472892 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
VTI1A-203ENST00000472892 TMEM57Q8N5G2 664 aa18.94■□□□□ 0.62
VTI1A-203ENST00000472892 XAGE2Q96GT9 111 aa18.94■□□□□ 0.62
VTI1A-203ENST00000472892 USP40Q9NVE5 1235 aa18.94■□□□□ 0.62
VTI1A-203ENST00000472892 SNCAIPQ9Y6H5 919 aa18.94■□□□□ 0.62
VTI1A-203ENST00000472892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.94■□□□□ 0.62
VTI1A-203ENST00000472892 OTOFQ9HC10 1997 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 SPDYE5A6NIY4 337 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 NFIAQ12857 509 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 CRHR2Q13324 411 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 DCAF15Q66K64 600 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
VTI1A-203ENST00000472892 BRI3BPQ8WY22 251 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 WRNIP1Q96S55 665 aa18.93■□□□□ 0.62
VTI1A-203ENST00000472892 MYH13Q9UKX3 1938 aa18.92■□□□□ 0.62
VTI1A-203ENST00000472892 MVPQ14764 893 aaKnown RBP18.92■□□□□ 0.62
VTI1A-203ENST00000472892 MIGA2Q7L4E1 593 aa18.92■□□□□ 0.62
VTI1A-203ENST00000472892 ERO1BQ86YB8 467 aa18.92■□□□□ 0.62
VTI1A-203ENST00000472892 ZKSCAN4Q969J2 545 aaPredicted RBP18.92■□□□□ 0.62
VTI1A-203ENST00000472892 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
VTI1A-203ENST00000472892 ZNF341Q9BYN7 854 aa18.92■□□□□ 0.62
VTI1A-203ENST00000472892 FAM198AQ9UFP1 575 aa18.92■□□□□ 0.62
VTI1A-203ENST00000472892 CCL15-CCL14A0A0B4J2E2 113 aa18.91■□□□□ 0.62
VTI1A-203ENST00000472892 TCP10Q12799 353 aa18.91■□□□□ 0.62
VTI1A-203ENST00000472892 G3BP1Q13283 466 aaKnown RBP eCLIP18.91■□□□□ 0.62
VTI1A-203ENST00000472892 CCL15Q16663 113 aa18.91■□□□□ 0.62
VTI1A-203ENST00000472892 FAM163AQ96GL9 167 aaPredicted RBP18.91■□□□□ 0.62
VTI1A-203ENST00000472892 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
VTI1A-203ENST00000472892 ZNF112Q9UJU3 913 aa18.91■□□□□ 0.62
VTI1A-203ENST00000472892 GAKO14976 1311 aa18.91■□□□□ 0.62
VTI1A-203ENST00000472892 SOX10P56693 466 aa18.9■□□□□ 0.62
VTI1A-203ENST00000472892 SPTY2D1Q68D10 685 aaPredicted RBP18.9■□□□□ 0.62
VTI1A-203ENST00000472892 IDI2Q9BXS1 227 aa18.9■□□□□ 0.62
VTI1A-203ENST00000472892 ABCF2Q9UG63 623 aa18.9■□□□□ 0.62
VTI1A-203ENST00000472892 IRF6O14896 467 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 MYCNP04198 464 aaPredicted RBP18.89■□□□□ 0.61
VTI1A-203ENST00000472892 ATP8B2P98198 1209 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 POLA2Q14181 598 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 OTOP1Q7RTM1 612 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 ZFPM1Q8IX07 1006 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 SLF2Q8IX21 1173 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 FAM43AQ8N2R8 423 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 ERO1AQ96HE7 468 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 TRIM17Q9Y577 477 aa18.89■□□□□ 0.61
VTI1A-203ENST00000472892 ENTPD3O75355 529 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 CETPP11597 493 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 INPP5BP32019 993 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 SP3Q02447 781 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 PPATQ06203 517 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 PPIL2Q13356 520 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 DZIP1Q86YF9 867 aaKnown RBP18.88■□□□□ 0.61
VTI1A-203ENST00000472892 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 ZFYVE28Q9HCC9 887 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 HMG20BQ9P0W2 317 aa18.88■□□□□ 0.61
VTI1A-203ENST00000472892 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
VTI1A-203ENST00000472892 SNAPC2Q13487 334 aa18.87■□□□□ 0.61
VTI1A-203ENST00000472892 GORABQ5T7V8 394 aa18.87■□□□□ 0.61
VTI1A-203ENST00000472892 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
VTI1A-203ENST00000472892 SPATA5Q8NB90 893 aa18.87■□□□□ 0.61
VTI1A-203ENST00000472892 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
VTI1A-203ENST00000472892 GPR75-ASB3A0A0A6YYF3 556 aa18.86■□□□□ 0.61
VTI1A-203ENST00000472892 ARID4AP29374 1257 aaPredicted RBP18.86■□□□□ 0.61
VTI1A-203ENST00000472892 RGS3P49796 1198 aa18.86■□□□□ 0.61
VTI1A-203ENST00000472892 MECOMQ03112 1051 aa18.86■□□□□ 0.61
VTI1A-203ENST00000472892 TAF1CQ15572 869 aaPredicted RBP18.86■□□□□ 0.61
VTI1A-203ENST00000472892 NOL9Q5SY16 702 aaKnown RBP18.86■□□□□ 0.61
VTI1A-203ENST00000472892 CD99L2Q8TCZ2 262 aa18.86■□□□□ 0.61
VTI1A-203ENST00000472892 ZNF384Q8TF68 577 aa18.86■□□□□ 0.61
VTI1A-203ENST00000472892 GPR108Q9NPR9 543 aa18.86■□□□□ 0.61
VTI1A-203ENST00000472892 MROH7-TTC4A0A0A0MT08 1334 aa18.85■□□□□ 0.61
VTI1A-203ENST00000472892 ZBED9Q6R2W3 1325 aa18.85■□□□□ 0.61
VTI1A-203ENST00000472892 WDHD1O75717 1129 aaPredicted RBP18.85■□□□□ 0.61
VTI1A-203ENST00000472892 RLBP1P12271 317 aa18.85■□□□□ 0.61
VTI1A-203ENST00000472892 MAP3K10Q02779 954 aa18.85■□□□□ 0.61
VTI1A-203ENST00000472892 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
VTI1A-203ENST00000472892 PTPN22Q9Y2R2 807 aa18.85■□□□□ 0.61
VTI1A-203ENST00000472892 RFX7Q2KHR2 1363 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms