RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 BMP2KLQ5H9B9 411 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 HHIPL2Q6UWX4 724 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 DLK2Q6UY11 383 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 NOL10Q9BSC4 688 aaKnown RBP12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 ANTXR1Q9H6X2 564 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 ZNF70Q9UC06 446 aaPredicted RBP12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 STAP2Q9UGK3 403 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 CACNB3P54284 484 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 CASC1Q6TDU7 716 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 APOBEC3FQ8IUX4 373 aaKnown RBP12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 ZDHHC15Q96MV8 337 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
SMARCD3-208ENST00000472789 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 CYP7A1P22680 504 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 BTDP43251 543 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 PRAMEF18Q5VWM3 479 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 HAUS7Q99871 368 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 MRIQ9BWK5 157 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 PITPNM2Q9BZ72 1349 aa12.77□□□□□ -0.37
SMARCD3-208ENST00000472789 AKAP11Q9UKA4 1901 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 POLR2AP24928 1970 aaKnown RBP12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 RASSF10A6NK89 507 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 TNNI2P48788 182 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 TNFAIP1Q13829 316 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 TTC22Q5TAA0 569 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 CDCA5Q96FF9 252 aa12.76□□□□□ -0.37
SMARCD3-208ENST00000472789 SLC34A2O95436 690 aa12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 NF2P35240 595 aa12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 SLC9C2Q5TAH2 1124 aa12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 AATFQ9NY61 560 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
SMARCD3-208ENST00000472789 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 GAKO14976 1311 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 BAG3O95817 575 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 TCP10Q12799 353 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 RASA3Q14644 834 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 DEFB115Q30KQ5 88 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 MIGA1Q8NAN2 632 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 ZNF384Q8TF68 577 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 ABHD8Q96I13 439 aa12.74□□□□□ -0.37
SMARCD3-208ENST00000472789 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 PDE6AP16499 860 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 PICALMQ13492 652 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 PRKG1Q13976 671 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 ADGRA1Q86SQ6 560 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 PPP2R3BQ9Y5P8 575 aa12.73□□□□□ -0.37
SMARCD3-208ENST00000472789 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 IGSF3O75054 1194 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 PLCG2P16885 1265 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 DYNLL1P63167 89 aaKnown RBP12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 NFIAQ12857 509 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 CST9Q5W186 159 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 ZSCAN25Q6NSZ9 544 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 TEX11Q8IYF3 940 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 PI4K2BQ8TCG2 481 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
SMARCD3-208ENST00000472789 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 HIP1O00291 1037 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 CDC45O75419 566 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 GRM1Q13255 1194 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 NBPF12Q5TAG4 269 aaPredicted RBP12.71□□□□□ -0.37
SMARCD3-208ENST00000472789 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms