RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 ARHGEF6Q15052 776 aa11.55□□□□□ -0.56
CPSF4-211ENST00000471455 ANKRD13AQ8IZ07 590 aa11.55□□□□□ -0.56
CPSF4-211ENST00000471455 CNNM1Q9NRU3 951 aa11.55□□□□□ -0.56
CPSF4-211ENST00000471455 CLRN2A0PK11 232 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 TAF5LO75529 589 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 WDHD1O75717 1129 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-211ENST00000471455 LDHAL6AQ6ZMR3 332 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 CERS5Q8N5B7 392 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 TNRC18O15417 2968 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-211ENST00000471455 LAMB1P07942 1786 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 SSC5DA1L4H1 1573 aa11.54□□□□□ -0.56
CPSF4-211ENST00000471455 GRM8O00222 908 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 TNNI2P48788 182 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 PPP4R3BQ5MIZ7 849 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 OTOP1Q7RTM1 612 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-211ENST00000471455 CLMNQ96JQ2 1002 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
CPSF4-211ENST00000471455 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 A0A1B0GUL6 1792 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 FAM205AQ6ZU69 1335 aa11.53□□□□□ -0.56
CPSF4-211ENST00000471455 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
CPSF4-211ENST00000471455 VAMP4O75379 141 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 PBX2P40425 430 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 FOXO4P98177 505 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 UBE4AQ14139 1066 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 RASA3Q14644 834 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 MFSD14BQ5SR56 506 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 BEND3Q5T5X7 828 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 LMBR1LQ6UX01 489 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 PRMT6Q96LA8 375 aaPredicted RBP11.52□□□□□ -0.57
CPSF4-211ENST00000471455 R3HDMLQ9H3Y0 253 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
CPSF4-211ENST00000471455 PLIN1O60240 522 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 ALDH1L1O75891 902 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 HIBADHP31937 336 aaKnown RBP11.51□□□□□ -0.57
CPSF4-211ENST00000471455 LSM11P83369 360 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPSF4-211ENST00000471455 SP3Q02447 781 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 CRHR2Q13324 411 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 NBPF12Q5TAG4 269 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-211ENST00000471455 VPS37DQ86XT2 251 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 HOOK2Q96ED9 719 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 TTF2Q9UNY4 1162 aaKnown RBP11.51□□□□□ -0.57
CPSF4-211ENST00000471455 FZD1Q9UP38 647 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 PTPN22Q9Y2R2 807 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 CSADQ9Y600 493 aa11.51□□□□□ -0.57
CPSF4-211ENST00000471455 KIAA0100Q14667 2235 aaKnown RBP11.51□□□□□ -0.57
CPSF4-211ENST00000471455 ARAP2Q8WZ64 1704 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-211ENST00000471455 SNAP23O00161 211 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 USP2O75604 605 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-211ENST00000471455 GTF2A2P52657 109 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
CPSF4-211ENST00000471455 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
CPSF4-211ENST00000471455 CD99L2Q8TCZ2 262 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 TBC1D22AQ8WUA7 517 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 ELP3Q9H9T3 547 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 MRS2Q9HD23 443 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 ZNF70Q9UC06 446 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-211ENST00000471455 JAG2Q9Y219 1238 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
CPSF4-211ENST00000471455 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
CPSF4-211ENST00000471455 F6X3S4 739 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 PSEN2P49810 448 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 CAVIN4Q5BKX8 364 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 NBPF11Q86T75 865 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 ADAM33Q9BZ11 813 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 ZFYVE28Q9HCC9 887 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 PCDHAC2Q9Y5I4 1007 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 MAST3O60307 1309 aa11.49□□□□□ -0.57
CPSF4-211ENST00000471455 CCL15-CCL14A0A0B4J2E2 113 aa11.48□□□□□ -0.57
CPSF4-211ENST00000471455 FRAT2O75474 233 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-211ENST00000471455 CRKP46108 304 aa11.48□□□□□ -0.57
CPSF4-211ENST00000471455 HDLBPQ00341 1268 aaKnown RBP11.48□□□□□ -0.57
CPSF4-211ENST00000471455 TAF1CQ15572 869 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-211ENST00000471455 CCL15Q16663 113 aa11.48□□□□□ -0.57
CPSF4-211ENST00000471455 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
CPSF4-211ENST00000471455 DZIP1LQ8IYY4 767 aaKnown RBP11.48□□□□□ -0.57
CPSF4-211ENST00000471455 ZNF594Q96JF6 807 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-211ENST00000471455 TDRD3Q9H7E2 651 aaKnown RBP11.48□□□□□ -0.57
CPSF4-211ENST00000471455 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
CPSF4-211ENST00000471455 TCP10L2B9ZVM9 353 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 ARHGAP33O14559 1287 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 GJA5P36382 358 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 GYG1P46976 350 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 VGLL4Q14135 290 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 KIF22Q14807 665 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms