RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 MARCH6O60337 910 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 DNAJC6O75061 913 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 ARNTP27540 789 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 CTBSQ01459 385 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 LRRC14Q15048 493 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 RUFY4Q6ZNE9 571 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 RBBP8NLQ8NC74 664 aaPredicted RBP9.46□□□□□ -0.9
SMC5-202ENST00000471372 RBSNQ9H1K0 784 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 POLR3KQ9Y2Y1 108 aaPredicted RBP9.46□□□□□ -0.9
SMC5-202ENST00000471372 PCDHB14Q9Y5E9 798 aa9.46□□□□□ -0.9
SMC5-202ENST00000471372 GRIN3BO60391 1043 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 CPB1P15086 417 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 SQSTM1Q13501 440 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 SYT9Q86SS6 491 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 CHMP4AQ9BY43 222 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 SPC25Q9HBM1 224 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 LEMD3Q9Y2U8 911 aa9.45□□□□□ -0.9
SMC5-202ENST00000471372 GJB6O95452 261 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 IMPDH2P12268 514 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 RPL6Q02878 288 aaKnown RBP9.44□□□□□ -0.9
SMC5-202ENST00000471372 ZNF252P-AS1Q0IIN9 211 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 FXNQ16595 210 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.44□□□□□ -0.9
SMC5-202ENST00000471372 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 LACRTQ9GZZ8 138 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 EHMT1Q9H9B1 1298 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
SMC5-202ENST00000471372 B2RBV5 119 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 ESRRAP11474 423 aaPredicted RBP9.43□□□□□ -0.9
SMC5-202ENST00000471372 ITGA6P23229 1130 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 CASP7P55210 303 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 PCSK7Q16549 785 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 KIAA0907Q7Z7F0 614 aaPredicted RBP9.43□□□□□ -0.9
SMC5-202ENST00000471372 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 ADAM19Q9H013 955 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 SLKQ9H2G2 1235 aaPredicted RBP9.43□□□□□ -0.9
SMC5-202ENST00000471372 ANTXR1Q9H6X2 564 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 SH2B1Q9NRF2 756 aaPredicted RBP9.43□□□□□ -0.9
SMC5-202ENST00000471372 TMEM260Q9NX78 707 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 NAGPAQ9UK23 515 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 TRIM33Q9UPN9 1127 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 PRKAB1Q9Y478 270 aa9.43□□□□□ -0.9
SMC5-202ENST00000471372 GPR25O00155 361 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 PTPRAP18433 802 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 CDK8P49336 464 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 GYS2P54840 703 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 MTERF2Q49AM1 385 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 PERM1Q5SV97 790 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 EMILIN2Q9BXX0 1053 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 KLHL42Q9P2K6 505 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 PHF24Q9UPV7 400 aa9.42□□□□□ -0.9
SMC5-202ENST00000471372 PPP1R12AO14974 1030 aaPredicted RBP9.41□□□□□ -0.9
SMC5-202ENST00000471372 DDAH1O94760 285 aa9.41□□□□□ -0.9
SMC5-202ENST00000471372 PCBP4P57723 403 aaKnown RBP9.41□□□□□ -0.9
SMC5-202ENST00000471372 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
SMC5-202ENST00000471372 DIEXFQ68CQ4 756 aaKnown RBP9.41□□□□□ -0.9
SMC5-202ENST00000471372 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
SMC5-202ENST00000471372 IRF7Q92985 503 aa9.41□□□□□ -0.9
SMC5-202ENST00000471372 GMCL1Q96IK5 515 aa9.41□□□□□ -0.9
SMC5-202ENST00000471372 SMG9Q9H0W8 520 aaKnown RBP9.41□□□□□ -0.9
SMC5-202ENST00000471372 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
SMC5-202ENST00000471372 C2CD2LO14523 706 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.9
SMC5-202ENST00000471372 ATE1O95260 518 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 SELPP16109 830 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 GMPRP36959 345 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 TKFCQ3LXA3 575 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 C2orf27AQ580R0 203 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 ZNF468Q5VIY5 522 aaPredicted RBP9.4□□□□□ -0.9
SMC5-202ENST00000471372 C6orf15Q6UXA7 325 aaPredicted RBP9.4□□□□□ -0.9
SMC5-202ENST00000471372 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.9
SMC5-202ENST00000471372 SLC6A14Q9UN76 642 aa9.4□□□□□ -0.9
SMC5-202ENST00000471372 KDM2BQ8NHM5 1336 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 A0A1W2PQH9 124 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 SIN3BO75182 1162 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 AMPD3Q01432 767 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 IKBKEQ14164 716 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 ARSHQ5FYA8 562 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 C16orf86Q6ZW13 317 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 TTC6Q86TZ1 520 aa9.39□□□□□ -0.91
SMC5-202ENST00000471372 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 H3BM21 787 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 SOX1O00570 391 aaPredicted RBP9.38□□□□□ -0.91
SMC5-202ENST00000471372 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
SMC5-202ENST00000471372 EPHA1P21709 976 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 MRM1Q6IN84 353 aaKnown RBP9.38□□□□□ -0.91
SMC5-202ENST00000471372 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 FAM178BQ8IXR5 827 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 JMYQ8N9B5 988 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 C19orf47Q8N9M1 422 aaKnown RBP9.38□□□□□ -0.91
SMC5-202ENST00000471372 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
SMC5-202ENST00000471372 LPIN3Q9BQK8 851 aa9.38□□□□□ -0.91
SMC5-202ENST00000471372 ZC3H12CQ9C0D7 883 aaKnown RBP9.38□□□□□ -0.91
SMC5-202ENST00000471372 NOL8Q76FK4 1167 aaKnown RBP9.37□□□□□ -0.91
SMC5-202ENST00000471372 TNFRSF25Q93038 417 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms