RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 SP3Q02447 781 aa21.52■■□□□ 1.04
LMNA-212ENST00000470835 TAF1CQ15572 869 aaPredicted RBP21.52■■□□□ 1.04
LMNA-212ENST00000470835 DCAF15Q66K64 600 aa21.52■■□□□ 1.04
LMNA-212ENST00000470835 ZKSCAN4Q969J2 545 aaPredicted RBP21.52■■□□□ 1.04
LMNA-212ENST00000470835 LDHBP07195 334 aaKnown RBP21.51■■□□□ 1.03
LMNA-212ENST00000470835 PHKA1P46020 1223 aa21.51■■□□□ 1.03
LMNA-212ENST00000470835 ERO1BQ86YB8 467 aa21.51■■□□□ 1.03
LMNA-212ENST00000470835 COPRSQ9NQ92 184 aa21.51■■□□□ 1.03
LMNA-212ENST00000470835 SALL1Q9NSC2 1324 aa21.51■■□□□ 1.03
LMNA-212ENST00000470835 KIAA0100Q14667 2235 aaKnown RBP21.51■■□□□ 1.03
LMNA-212ENST00000470835 SEMA3EO15041 775 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 CDC42EP5Q6NZY7 148 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 FAM43AQ8N2R8 423 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 FAM151AQ8WW52 585 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 ZNF341Q9BYN7 854 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 EFCC1Q9HA90 598 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 ZFYVE28Q9HCC9 887 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 DENND2AQ9ULE3 1009 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 PTPN22Q9Y2R2 807 aa21.5■■□□□ 1.03
LMNA-212ENST00000470835 SLC34A2O95436 690 aa21.49■■□□□ 1.03
LMNA-212ENST00000470835 ADORA1P30542 326 aa21.49■■□□□ 1.03
LMNA-212ENST00000470835 TCP10Q12799 353 aa21.49■■□□□ 1.03
LMNA-212ENST00000470835 INTS3Q68E01 1043 aaKnown RBP21.49■■□□□ 1.03
LMNA-212ENST00000470835 MIGA2Q7L4E1 593 aa21.49■■□□□ 1.03
LMNA-212ENST00000470835 ARHGAP45Q92619 1136 aa21.49■■□□□ 1.03
LMNA-212ENST00000470835 IRF6O14896 467 aa21.48■■□□□ 1.03
LMNA-212ENST00000470835 CETPP11597 493 aa21.48■■□□□ 1.03
LMNA-212ENST00000470835 CAP1Q01518 475 aa21.48■■□□□ 1.03
LMNA-212ENST00000470835 NFIAQ12857 509 aa21.48■■□□□ 1.03
LMNA-212ENST00000470835 PPIL2Q13356 520 aa21.48■■□□□ 1.03
LMNA-212ENST00000470835 GNAI3P08754 354 aa21.47■■□□□ 1.03
LMNA-212ENST00000470835 INPP5BP32019 993 aa21.47■■□□□ 1.03
LMNA-212ENST00000470835 SNAPC2Q13487 334 aa21.47■■□□□ 1.03
LMNA-212ENST00000470835 CCDC102BQ68D86 513 aa21.47■■□□□ 1.03
LMNA-212ENST00000470835 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
LMNA-212ENST00000470835 WDHD1O75717 1129 aaPredicted RBP21.46■■□□□ 1.03
LMNA-212ENST00000470835 USP40Q9NVE5 1235 aa21.46■■□□□ 1.03
LMNA-212ENST00000470835 BTBD19C9JJ37 291 aa21.45■■□□□ 1.02
LMNA-212ENST00000470835 RASGRF1Q13972 1273 aa21.45■■□□□ 1.02
LMNA-212ENST00000470835 PRPF38BQ5VTL8 546 aaKnown RBP21.45■■□□□ 1.02
LMNA-212ENST00000470835 ZGPATQ8N5A5 531 aaKnown RBP21.45■■□□□ 1.02
LMNA-212ENST00000470835 ZCCHC17Q9NP64 241 aaKnown RBP21.45■■□□□ 1.02
LMNA-212ENST00000470835 FAM198AQ9UFP1 575 aa21.45■■□□□ 1.02
LMNA-212ENST00000470835 DOCK1Q14185 1865 aa21.45■■□□□ 1.02
LMNA-212ENST00000470835 ZBTB22O15209 634 aa21.44■■□□□ 1.02
LMNA-212ENST00000470835 TIMM10P62072 90 aa21.44■■□□□ 1.02
LMNA-212ENST00000470835 PPATQ06203 517 aa21.44■■□□□ 1.02
LMNA-212ENST00000470835 MTX1Q13505 466 aa21.44■■□□□ 1.02
LMNA-212ENST00000470835 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
LMNA-212ENST00000470835 PTPRFP10586 1907 aa21.44■■□□□ 1.02
LMNA-212ENST00000470835 PDS5AQ29RF7 1337 aaKnown RBP21.44■■□□□ 1.02
LMNA-212ENST00000470835 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 POTEFA5A3E0 1075 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 TLR2O60603 784 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 TRIM27P14373 513 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 TFCP2Q12800 502 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 ARHGEF6Q15052 776 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.43■■□□□ 1.02
LMNA-212ENST00000470835 ARMC5Q96C12 935 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 ABCF2Q9UG63 623 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 ZNF112Q9UJU3 913 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 GAKO14976 1311 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 RFX7Q2KHR2 1363 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 BRCA2P51587 3418 aa21.43■■□□□ 1.02
LMNA-212ENST00000470835 IPO8O15397 1037 aaKnown RBP21.42■■□□□ 1.02
LMNA-212ENST00000470835 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
LMNA-212ENST00000470835 FRAT1Q92837 279 aaPredicted RBP21.42■■□□□ 1.02
LMNA-212ENST00000470835 XAGE2Q96GT9 111 aa21.42■■□□□ 1.02
LMNA-212ENST00000470835 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
LMNA-212ENST00000470835 MKI67P46013 3256 aaKnown RBP21.42■■□□□ 1.02
LMNA-212ENST00000470835 PHIPQ8WWQ0 1821 aa21.41■■□□□ 1.02
LMNA-212ENST00000470835 ATRNL1Q5VV63 1379 aa21.41■■□□□ 1.02
LMNA-212ENST00000470835 RGS3P49796 1198 aa21.41■■□□□ 1.02
LMNA-212ENST00000470835 ATF7IPQ6VMQ6 1270 aa21.41■■□□□ 1.02
LMNA-212ENST00000470835 ZFPM1Q8IX07 1006 aa21.41■■□□□ 1.02
LMNA-212ENST00000470835 MGAMO43451 1857 aa21.41■■□□□ 1.02
LMNA-212ENST00000470835 BCAR3O75815 825 aa21.4■■□□□ 1.02
LMNA-212ENST00000470835 NOL9Q5SY16 702 aaKnown RBP21.4■■□□□ 1.02
LMNA-212ENST00000470835 SLF2Q8IX21 1173 aa21.4■■□□□ 1.02
LMNA-212ENST00000470835 IDI2Q9BXS1 227 aa21.4■■□□□ 1.02
LMNA-212ENST00000470835 PTCH2Q9Y6C5 1203 aa21.4■■□□□ 1.02
LMNA-212ENST00000470835 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.4■■□□□ 1.02
LMNA-212ENST00000470835 MAST2Q6P0Q8 1798 aa21.4■■□□□ 1.02
LMNA-212ENST00000470835 ATAD5Q96QE3 1844 aa21.39■■□□□ 1.02
LMNA-212ENST00000470835 ENTPD3O75355 529 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 GNAI2P04899 355 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 LACTBP83111 547 aaPredicted RBP21.39■■□□□ 1.01
LMNA-212ENST00000470835 KIF22Q14807 665 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 SPTY2D1Q68D10 685 aaPredicted RBP21.39■■□□□ 1.01
LMNA-212ENST00000470835 CLUAP1Q96AJ1 413 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 NEUROD6Q96NK8 337 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 ARHGAP39Q9C0H5 1083 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 KCNH4Q9UQ05 1017 aa21.39■■□□□ 1.01
LMNA-212ENST00000470835 MROH7-TTC4A0A0A0MT08 1334 aa21.38■■□□□ 1.01
LMNA-212ENST00000470835 BTDP43251 543 aa21.38■■□□□ 1.01
LMNA-212ENST00000470835 ANKRD23Q86SG2 305 aa21.38■■□□□ 1.01
LMNA-212ENST00000470835 ZSCAN29Q8IWY8 852 aaPredicted RBP21.38■■□□□ 1.01
LMNA-212ENST00000470835 PNMA6EA0A0J9YXQ4 647 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms