RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 FBXO46Q6PJ61 603 aaPredicted RBP17.65■□□□□ 0.42
CDKN2A-204ENST00000470819 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
CDKN2A-204ENST00000470819 ZKSCAN4Q969J2 545 aaPredicted RBP17.65■□□□□ 0.42
CDKN2A-204ENST00000470819 OTUD5Q96G74 571 aa17.65■□□□□ 0.42
CDKN2A-204ENST00000470819 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
CDKN2A-204ENST00000470819 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.65■□□□□ 0.42
CDKN2A-204ENST00000470819 CCL15-CCL14A0A0B4J2E2 113 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 SEMA3EO15041 775 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 GTF2A2P52657 109 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 TCP10Q12799 353 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 NFIAQ12857 509 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 CCL15Q16663 113 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 HOOK2Q96ED9 719 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 USP40Q9NVE5 1235 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 SNCAIPQ9Y6H5 919 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
CDKN2A-204ENST00000470819 A0A1B0GUL7 405 aa17.63■□□□□ 0.41
CDKN2A-204ENST00000470819 SPDYE5A6NIY4 337 aa17.63■□□□□ 0.41
CDKN2A-204ENST00000470819 RASGRF1Q13972 1273 aa17.63■□□□□ 0.41
CDKN2A-204ENST00000470819 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
CDKN2A-204ENST00000470819 TRIM17Q9Y577 477 aa17.63■□□□□ 0.41
CDKN2A-204ENST00000470819 GNAI2P04899 355 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 OTOP1Q7RTM1 612 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 CD99L2Q8TCZ2 262 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 ZNF341Q9BYN7 854 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 FAM198AQ9UFP1 575 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
CDKN2A-204ENST00000470819 PNMA6EA0A0J9YXQ4 647 aa17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 INPP5BP32019 993 aa17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 ZFPM1Q8IX07 1006 aa17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 TMEM57Q8N5G2 664 aa17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 ERO1AQ96HE7 468 aa17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 ABCF2Q9UG63 623 aa17.61■□□□□ 0.41
CDKN2A-204ENST00000470819 IRF6O14896 467 aa17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 ZBTB22O15209 634 aa17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 CAP1Q01518 475 aa17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 SP3Q02447 781 aa17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 TAF1CQ15572 869 aaPredicted RBP17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 RPAP1Q9BWH6 1393 aaPredicted RBP17.6■□□□□ 0.41
CDKN2A-204ENST00000470819 CETPP11597 493 aa17.59■□□□□ 0.41
CDKN2A-204ENST00000470819 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
CDKN2A-204ENST00000470819 ZGPATQ8N5A5 531 aaKnown RBP17.59■□□□□ 0.41
CDKN2A-204ENST00000470819 ZFYVE28Q9HCC9 887 aa17.59■□□□□ 0.41
CDKN2A-204ENST00000470819 G3BP1Q13283 466 aaKnown RBP eCLIP17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 PPIL2Q13356 520 aa17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 SNAPC2Q13487 334 aa17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 EFCC1Q9HA90 598 aa17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 PTPN22Q9Y2R2 807 aa17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 OTOFQ9HC10 1997 aa17.58■□□□□ 0.4
CDKN2A-204ENST00000470819 GAKO14976 1311 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 PDS5AQ29RF7 1337 aaKnown RBP17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 BTBD19C9JJ37 291 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 RGS3P49796 1198 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 PPATQ06203 517 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 GORABQ5T7V8 394 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 SPTY2D1Q68D10 685 aaPredicted RBP17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 PI16Q6UXB8 463 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 HMG20BQ9P0W2 317 aa17.57■□□□□ 0.4
CDKN2A-204ENST00000470819 MECOMQ03112 1051 aa17.56■□□□□ 0.4
CDKN2A-204ENST00000470819 TBC1D9Q6ZT07 1266 aa17.56■□□□□ 0.4
CDKN2A-204ENST00000470819 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
CDKN2A-204ENST00000470819 FAM163AQ96GL9 167 aaPredicted RBP17.56■□□□□ 0.4
CDKN2A-204ENST00000470819 ENTPD3O75355 529 aa17.55■□□□□ 0.4
CDKN2A-204ENST00000470819 BTDP43251 543 aa17.55■□□□□ 0.4
CDKN2A-204ENST00000470819 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
CDKN2A-204ENST00000470819 SLF2Q8IX21 1173 aa17.55■□□□□ 0.4
CDKN2A-204ENST00000470819 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
CDKN2A-204ENST00000470819 ZNF384Q8TF68 577 aa17.55■□□□□ 0.4
CDKN2A-204ENST00000470819 WDHD1O75717 1129 aaPredicted RBP17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 ATP8B2P98198 1209 aa17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 POLA2Q14181 598 aa17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 ZSCAN29Q8IWY8 852 aaPredicted RBP17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 DDX4Q9NQI0 724 aaKnown RBP17.54■□□□□ 0.4
CDKN2A-204ENST00000470819 MROH7-TTC4A0A0A0MT08 1334 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 DDTLA6NHG4 134 aaPredicted RBP17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 PHF20L1A8MW92 1017 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 TLR2O60603 784 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 RLBP1P12271 317 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 ARID4AP29374 1257 aaPredicted RBP17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 PICALMQ13492 652 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 NOL9Q5SY16 702 aaKnown RBP17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 ZCCHC17Q9NP64 241 aaKnown RBP17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 KCNH4Q9UQ05 1017 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 LAMB1P07942 1786 aa17.53■□□□□ 0.4
CDKN2A-204ENST00000470819 MCAMP43121 646 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms