RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PXYLP1Q8TE99 480 aa15.33■□□□□ 0.04
LSM2-209ENST00000470083 PAWRQ96IZ0 340 aaKnown RBP15.33■□□□□ 0.04
LSM2-209ENST00000470083 ELNP15502 786 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 FLT3LGP49771 235 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 HDLBPQ00341 1268 aaKnown RBP15.32■□□□□ 0.04
LSM2-209ENST00000470083 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
LSM2-209ENST00000470083 RALBP1Q15311 655 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 FKBP1CQ5VVH2 108 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 C7orf61Q8IZ16 206 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 ZNF341Q9BYN7 854 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 MYH16Q9H6N6 1097 aa15.32■□□□□ 0.04
LSM2-209ENST00000470083 ZMYND8Q9ULU4 1186 aaPredicted RBP15.32■□□□□ 0.04
LSM2-209ENST00000470083 INPP5BP32019 993 aa15.31■□□□□ 0.04
LSM2-209ENST00000470083 IRF5Q13568 498 aa15.31■□□□□ 0.04
LSM2-209ENST00000470083 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
LSM2-209ENST00000470083 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
LSM2-209ENST00000470083 TMOD2Q9NZR1 351 aa15.31■□□□□ 0.04
LSM2-209ENST00000470083 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
LSM2-209ENST00000470083 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
LSM2-209ENST00000470083 CYP2C8P10632 490 aa15.3■□□□□ 0.04
LSM2-209ENST00000470083 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
LSM2-209ENST00000470083 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
LSM2-209ENST00000470083 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
LSM2-209ENST00000470083 TSPYL6Q8N831 410 aa15.3■□□□□ 0.04
LSM2-209ENST00000470083 ANKLE1Q8NAG6 615 aa15.3■□□□□ 0.04
LSM2-209ENST00000470083 TEKT1Q969V4 418 aa15.3■□□□□ 0.04
LSM2-209ENST00000470083 EYSQ5T1H1 3165 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 RPTORQ8N122 1335 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 PLIN1O60240 522 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 GYG1P46976 350 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 UBE4AQ14139 1066 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 GRIK5Q16478 980 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
LSM2-209ENST00000470083 ZDHHC15Q96MV8 337 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
LSM2-209ENST00000470083 FOXO4P98177 505 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 GPAT2Q6NUI2 795 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 LDHAL6AQ6ZMR3 332 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 G2E3Q7L622 706 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 LINS1Q8NG48 757 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 ZNF112Q9UJU3 913 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 CHMP3Q9Y3E7 222 aa15.28■□□□□ 0.04
LSM2-209ENST00000470083 CXCL11O14625 94 aa15.27■□□□□ 0.04
LSM2-209ENST00000470083 TNPO2O14787 897 aaKnown RBP15.27■□□□□ 0.04
LSM2-209ENST00000470083 SYN1P17600 705 aa15.27■□□□□ 0.04
LSM2-209ENST00000470083 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
LSM2-209ENST00000470083 APOBEC3HQ6NTF7 200 aaKnown RBP15.27■□□□□ 0.04
LSM2-209ENST00000470083 TBC1D22AQ8WUA7 517 aa15.27■□□□□ 0.04
LSM2-209ENST00000470083 MRIQ9BWK5 157 aa15.27■□□□□ 0.04
LSM2-209ENST00000470083 UBE2OQ9C0C9 1292 aaKnown RBP15.27■□□□□ 0.04
LSM2-209ENST00000470083 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.04
LSM2-209ENST00000470083 CNNM1Q9NRU3 951 aa15.27■□□□□ 0.04
LSM2-209ENST00000470083 TTC28Q96AY4 2481 aa15.27■□□□□ 0.03
LSM2-209ENST00000470083 CCDC57Q2TAC2 916 aa15.26■□□□□ 0.03
LSM2-209ENST00000470083 TAF7LQ5H9L4 462 aa15.26■□□□□ 0.03
LSM2-209ENST00000470083 FAM109BQ6ICB4 259 aaPredicted RBP15.26■□□□□ 0.03
LSM2-209ENST00000470083 DNAAF4Q8WXU2 420 aa15.26■□□□□ 0.03
LSM2-209ENST00000470083 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
LSM2-209ENST00000470083 GUCD1Q96NT3 240 aa15.26■□□□□ 0.03
LSM2-209ENST00000470083 NBPF3Q9H094 633 aa15.26■□□□□ 0.03
LSM2-209ENST00000470083 PRUNE2Q8WUY3 3088 aa15.26■□□□□ 0.03
LSM2-209ENST00000470083 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
LSM2-209ENST00000470083 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
LSM2-209ENST00000470083 LMBR1LQ6UX01 489 aa15.25■□□□□ 0.03
LSM2-209ENST00000470083 A0A1B0GUL6 1792 aa15.25■□□□□ 0.03
LSM2-209ENST00000470083 MUC3AQ02505 3323 aa15.24■□□□□ 0.03
LSM2-209ENST00000470083 ALPK3Q96L96 1907 aa15.24■□□□□ 0.03
LSM2-209ENST00000470083 A0A0G2JLL6 359 aaPredicted RBP15.24■□□□□ 0.03
LSM2-209ENST00000470083 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
LSM2-209ENST00000470083 FLIIQ13045 1269 aa15.24■□□□□ 0.03
LSM2-209ENST00000470083 CHAF1AQ13111 956 aaPredicted RBP15.24■□□□□ 0.03
LSM2-209ENST00000470083 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
LSM2-209ENST00000470083 FASTKD5Q7L8L6 764 aaKnown RBP15.24■□□□□ 0.03
LSM2-209ENST00000470083 PRRT2Q7Z6L0 340 aaPredicted RBP15.24■□□□□ 0.03
LSM2-209ENST00000470083 TAOK2Q9UL54 1235 aa15.24■□□□□ 0.03
LSM2-209ENST00000470083 SLC45A1Q9Y2W3 748 aa15.24■□□□□ 0.03
LSM2-209ENST00000470083 MAST3O60307 1309 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 APAF1O14727 1248 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
LSM2-209ENST00000470083 FBXO33Q7Z6M2 555 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 VPS37DQ86XT2 251 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 FAM151AQ8WW52 585 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 COA7Q96BR5 231 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 IQSEC3Q9UPP2 1182 aaPredicted RBP15.23■□□□□ 0.03
LSM2-209ENST00000470083 SUGT1Q9Y2Z0 365 aa15.23■□□□□ 0.03
LSM2-209ENST00000470083 HMGCRP04035 888 aa15.22■□□□□ 0.03
LSM2-209ENST00000470083 EPHA10Q5JZY3 1008 aa15.22■□□□□ 0.03
LSM2-209ENST00000470083 HHIPL2Q6UWX4 724 aa15.22■□□□□ 0.03
LSM2-209ENST00000470083 SMCR8Q8TEV9 937 aaPredicted RBP15.22■□□□□ 0.03
LSM2-209ENST00000470083 FRAT2O75474 233 aaPredicted RBP15.21■□□□□ 0.03
LSM2-209ENST00000470083 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
LSM2-209ENST00000470083 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
LSM2-209ENST00000470083 TSR2Q969E8 191 aaKnown RBP15.2■□□□□ 0.02
LSM2-209ENST00000470083 HMX1Q9NP08 348 aaPredicted RBP15.2■□□□□ 0.02
LSM2-209ENST00000470083 OGDHLQ9ULD0 1010 aa15.2■□□□□ 0.02
LSM2-209ENST00000470083 ZHX2Q9Y6X8 837 aa15.2■□□□□ 0.02
LSM2-209ENST00000470083 PFASO15067 1338 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms