RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 LCORLQ8N3X6 602 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 NACAP1Q9BZK3 213 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-208ENST00000469529 ARMT1Q9H993 441 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
TRAF4-208ENST00000469529 FZD9O00144 591 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 CYP21A2P08686 494 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 PRELPP51888 382 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 TNIP1Q15025 636 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-208ENST00000469529 CRNKL1Q9BZJ0 848 aaKnown RBP15.2■□□□□ 0.02
TRAF4-208ENST00000469529 ZSWIM6Q9HCJ5 1215 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 NMRK2Q9NPI5 230 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 MKRN1Q9UHC7 482 aaKnown RBP15.2■□□□□ 0.02
TRAF4-208ENST00000469529 SERPINA10Q9UK55 444 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 JAG2Q9Y219 1238 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 SLC4A4Q9Y6R1 1079 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 CACNA1SQ13698 1873 aa15.2■□□□□ 0.02
TRAF4-208ENST00000469529 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
TRAF4-208ENST00000469529 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
TRAF4-208ENST00000469529 NT5C2P49902 561 aa15.19■□□□□ 0.02
TRAF4-208ENST00000469529 CXCL9Q07325 125 aa15.19■□□□□ 0.02
TRAF4-208ENST00000469529 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
TRAF4-208ENST00000469529 SBK1Q52WX2 424 aa15.19■□□□□ 0.02
TRAF4-208ENST00000469529 MIGA1Q8NAN2 632 aa15.19■□□□□ 0.02
TRAF4-208ENST00000469529 ZDHHC15Q96MV8 337 aa15.19■□□□□ 0.02
TRAF4-208ENST00000469529 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
TRAF4-208ENST00000469529 ANAPC4Q9UJX5 808 aa15.19■□□□□ 0.02
TRAF4-208ENST00000469529 TTF2Q9UNY4 1162 aaKnown RBP15.19■□□□□ 0.02
TRAF4-208ENST00000469529 ZNF213O14771 459 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 HMGB1P09429 215 aaKnown RBP15.18■□□□□ 0.02
TRAF4-208ENST00000469529 RPS12P25398 132 aaKnown RBP15.18■□□□□ 0.02
TRAF4-208ENST00000469529 MCM2P49736 904 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 RHBDL3P58872 404 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
TRAF4-208ENST00000469529 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 MTMR14Q8NCE2 650 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 TEKT1Q969V4 418 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRAF4-208ENST00000469529 DAGLAQ9Y4D2 1042 aa15.18■□□□□ 0.02
TRAF4-208ENST00000469529 FER1L6Q2WGJ9 1857 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 CCDC88AQ3V6T2 1871 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 PSMD14O00487 310 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 PRKAB2O43741 272 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 FGRP09769 529 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 PCP11498 1178 aaKnown RBP15.17■□□□□ 0.02
TRAF4-208ENST00000469529 CIAPIN1Q6FI81 312 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 APOBEC3HQ6NTF7 200 aaKnown RBP15.17■□□□□ 0.02
TRAF4-208ENST00000469529 FBXL16Q8N461 479 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 DPF2Q92785 391 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 IPO9Q96P70 1041 aaKnown RBP15.17■□□□□ 0.02
TRAF4-208ENST00000469529 EPB41L4AQ9HCS5 686 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-208ENST00000469529 DCP1AQ9NPI6 582 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-208ENST00000469529 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
TRAF4-208ENST00000469529 APPP05067 770 aa15.16■□□□□ 0.02
TRAF4-208ENST00000469529 CRKP46108 304 aa15.16■□□□□ 0.02
TRAF4-208ENST00000469529 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
TRAF4-208ENST00000469529 NAPBQ9H115 298 aa15.16■□□□□ 0.02
TRAF4-208ENST00000469529 GLTPD2A6NH11 291 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 ST18O60284 1047 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 BTDP43251 543 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 BECN1Q14457 450 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 TTC14Q96N46 770 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 NEK1Q96PY6 1258 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 RRAGCQ9HB90 399 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 CYP46A1Q9Y6A2 500 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 COL4A5P29400 1685 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 WDR19Q8NEZ3 1342 aa15.15■□□□□ 0.02
TRAF4-208ENST00000469529 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 E7EWF7 191 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 RAD17O75943 681 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 TOMM70O94826 608 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 USP17L8P0C7I0 530 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 NEK4P51957 841 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 EIF6P56537 245 aaKnown RBP15.14■□□□□ 0.01
TRAF4-208ENST00000469529 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-208ENST00000469529 EXOSC10Q01780 885 aaKnown RBP15.14■□□□□ 0.01
TRAF4-208ENST00000469529 CTR9Q6PD62 1173 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 KIAA0825Q8IV33 1275 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 FBXW7Q969H0 707 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-208ENST00000469529 MTA3Q9BTC8 594 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 IDI2Q9BXS1 227 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 HDAC9Q9UKV0 1011 aa15.14■□□□□ 0.01
TRAF4-208ENST00000469529 MYH7P12883 1935 aa15.13■□□□□ 0.01
TRAF4-208ENST00000469529 DHX32Q7L7V1 743 aaKnown RBP15.13■□□□□ 0.01
TRAF4-208ENST00000469529 OGFOD1Q8N543 542 aa15.13■□□□□ 0.01
TRAF4-208ENST00000469529 SH3RF3Q8TEJ3 882 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-208ENST00000469529 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
TRAF4-208ENST00000469529 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
TRAF4-208ENST00000469529 JAKMIP1Q96N16 626 aaKnown RBP15.13■□□□□ 0.01
TRAF4-208ENST00000469529 TBC1D2Q9BYX2 928 aa15.13■□□□□ 0.01
TRAF4-208ENST00000469529 RNF41Q9H4P4 317 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-208ENST00000469529 ARPP21Q9UBL0 812 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-208ENST00000469529 TAF6LQ9Y6J9 622 aa15.13■□□□□ 0.01
TRAF4-208ENST00000469529 DICER1Q9UPY3 1922 aaKnown RBP15.13■□□□□ 0.01
TRAF4-208ENST00000469529 MYO5AQ9Y4I1 1855 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms