RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 GJA5P36382 358 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 ARHGEF6Q15052 776 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 ERO1BQ86YB8 467 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 SLF2Q8IX21 1173 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 FAM151AQ8WW52 585 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 SIL1Q9H173 461 aa13.62□□□□□ -0.23
COL4A3-204ENST00000469504 MEIS3Q99687 375 aa13.61□□□□□ -0.23
COL4A3-204ENST00000469504 ZNF341Q9BYN7 854 aa13.61□□□□□ -0.23
COL4A3-204ENST00000469504 CETPP11597 493 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 CRHR2Q13324 411 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 WRNIP1Q96S55 665 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 PTPN18Q99952 460 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 R3HDMLQ9H3Y0 253 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 ZFYVE28Q9HCC9 887 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 DAGLAQ9Y4D2 1042 aa13.6□□□□□ -0.23
COL4A3-204ENST00000469504 CCL15-CCL14A0A0B4J2E2 113 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 SRGAP3O43295 1099 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 PRDX5P30044 214 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 CACNB3P54284 484 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 SOX10P56693 466 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 SP3Q02447 781 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 PPATQ06203 517 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 PPIL2Q13356 520 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 SNAPC2Q13487 334 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 MVPQ14764 893 aaKnown RBP13.59□□□□□ -0.23
COL4A3-204ENST00000469504 CCL15Q16663 113 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 SPTY2D1Q68D10 685 aaPredicted RBP13.59□□□□□ -0.23
COL4A3-204ENST00000469504 CCDC102BQ68D86 513 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 CDAN1Q8IWY9 1227 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
COL4A3-204ENST00000469504 OTOFQ9HC10 1997 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 GNAI2P04899 355 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 PHKA1P46020 1223 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 CDC42EP5Q6NZY7 148 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 BRI3BPQ8WY22 251 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
COL4A3-204ENST00000469504 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
COL4A3-204ENST00000469504 SNCAIPQ9Y6H5 919 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 GAKO14976 1311 aa13.58□□□□□ -0.24
COL4A3-204ENST00000469504 A0A1B0GUL7 405 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 ENTPD3O75355 529 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-204ENST00000469504 TRIM27P14373 513 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 TAF1CQ15572 869 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-204ENST00000469504 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 FAM163AQ96GL9 167 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-204ENST00000469504 IDI2Q9BXS1 227 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 EFCC1Q9HA90 598 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
COL4A3-204ENST00000469504 MYH13Q9UKX3 1938 aa13.56□□□□□ -0.24
COL4A3-204ENST00000469504 IGSF3O75054 1194 aa13.56□□□□□ -0.24
COL4A3-204ENST00000469504 GNRH1P01148 92 aa13.56□□□□□ -0.24
COL4A3-204ENST00000469504 NOL9Q5SY16 702 aaKnown RBP13.56□□□□□ -0.24
COL4A3-204ENST00000469504 POTEHQ6S545 545 aa13.56□□□□□ -0.24
COL4A3-204ENST00000469504 DZIP1Q86YF9 867 aaKnown RBP13.56□□□□□ -0.24
COL4A3-204ENST00000469504 USP40Q9NVE5 1235 aa13.56□□□□□ -0.24
COL4A3-204ENST00000469504 PTPN22Q9Y2R2 807 aa13.56□□□□□ -0.24
COL4A3-204ENST00000469504 IRF6O14896 467 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 TLR2O60603 784 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 RASGRF1Q13972 1273 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 CD99L2Q8TCZ2 262 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-204ENST00000469504 XAGE2Q96GT9 111 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
COL4A3-204ENST00000469504 ADORA1P30542 326 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 TIMM10P62072 90 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 GSTO1P78417 241 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 TFCP2Q12800 502 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 NFIAQ12857 509 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL4A3-204ENST00000469504 KIF22Q14807 665 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 MIGA2Q7L4E1 593 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
COL4A3-204ENST00000469504 ARMC5Q96C12 935 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 FAM198AQ9UFP1 575 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 ABCF2Q9UG63 623 aa13.54□□□□□ -0.24
COL4A3-204ENST00000469504 LDHCP07864 332 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 UQCRFS1P1P0C7P4 283 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 PRMT2P55345 433 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 MAP3K10Q02779 954 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 TCP10Q12799 353 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 GORABQ5T7V8 394 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 MROH7-TTC4A0A0A0MT08 1334 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 RFX7Q2KHR2 1363 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 PDE4DIPQ5VU43 2346 aa13.53□□□□□ -0.24
COL4A3-204ENST00000469504 GPR75-ASB3A0A0A6YYF3 556 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 BTBD19C9JJ37 291 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 CXCL11O14625 94 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 BCAR3O75815 825 aa13.52□□□□□ -0.25
COL4A3-204ENST00000469504 ARID4AP29374 1257 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms