RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 CTSWP56202 376 aa13.72□□□□□ -0.21
TRAIP-202ENST00000469027 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
TRAIP-202ENST00000469027 SMCR8Q8TEV9 937 aaPredicted RBP13.72□□□□□ -0.21
TRAIP-202ENST00000469027 MYD88Q99836 296 aa13.72□□□□□ -0.21
TRAIP-202ENST00000469027 LRFN3Q9BTN0 628 aa13.72□□□□□ -0.21
TRAIP-202ENST00000469027 ANKRD2Q9GZV1 360 aa13.72□□□□□ -0.21
TRAIP-202ENST00000469027 DOCK3Q8IZD9 2030 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 TRIM32Q13049 653 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 NFE2L2Q16236 605 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 C9orf50Q5SZB4 431 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 HDGFL1Q5TGJ6 251 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
TRAIP-202ENST00000469027 HOOK2Q96ED9 719 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 GREM2Q9H772 168 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 KCNH4Q9UQ05 1017 aa13.71□□□□□ -0.21
TRAIP-202ENST00000469027 INPP5BP32019 993 aa13.7□□□□□ -0.22
TRAIP-202ENST00000469027 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
TRAIP-202ENST00000469027 ZNF804AQ7Z570 1209 aa13.7□□□□□ -0.22
TRAIP-202ENST00000469027 TTF2Q9UNY4 1162 aaKnown RBP13.7□□□□□ -0.22
TRAIP-202ENST00000469027 CACNB3P54284 484 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 FKBP1AP62942 108 aaKnown RBP13.69□□□□□ -0.22
TRAIP-202ENST00000469027 MOGSQ13724 837 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 GRIN2CQ14957 1233 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 KRT24Q2M2I5 525 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 NECAB3Q96P71 396 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-202ENST00000469027 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 ZNF341Q9BYN7 854 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-202ENST00000469027 DBF4Q9UBU7 674 aaPredicted RBP13.69□□□□□ -0.22
TRAIP-202ENST00000469027 SERPINA10Q9UK55 444 aa13.69□□□□□ -0.22
TRAIP-202ENST00000469027 COL6A1P12109 1028 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 PPP2R1AP30153 589 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 GPAT2Q6NUI2 795 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 GADL1Q6ZQY3 521 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 TTLL11Q8NHH1 800 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 GAS2L1Q99501 681 aaPredicted RBP13.68□□□□□ -0.22
TRAIP-202ENST00000469027 P2RX7Q99572 595 aaKnown RBP13.68□□□□□ -0.22
TRAIP-202ENST00000469027 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
TRAIP-202ENST00000469027 MAPK8IP3Q9UPT6 1336 aa13.67□□□□□ -0.22
TRAIP-202ENST00000469027 SNAP23O00161 211 aa13.67□□□□□ -0.22
TRAIP-202ENST00000469027 MRE11P49959 708 aa13.67□□□□□ -0.22
TRAIP-202ENST00000469027 PDE3AQ14432 1141 aa13.67□□□□□ -0.22
TRAIP-202ENST00000469027 MFSD14BQ5SR56 506 aa13.67□□□□□ -0.22
TRAIP-202ENST00000469027 ANKRD13CQ8N6S4 541 aa13.67□□□□□ -0.22
TRAIP-202ENST00000469027 TCF20Q9UGU0 1960 aaKnown RBP13.66□□□□□ -0.22
TRAIP-202ENST00000469027 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
TRAIP-202ENST00000469027 CRKP46108 304 aa13.66□□□□□ -0.22
TRAIP-202ENST00000469027 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-202ENST00000469027 SENP6Q9GZR1 1112 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-202ENST00000469027 PRDM5Q9NQX1 630 aaPredicted RBP13.66□□□□□ -0.22
TRAIP-202ENST00000469027 MYH3P11055 1940 aa13.65□□□□□ -0.22
TRAIP-202ENST00000469027 IL1R1P14778 569 aa13.65□□□□□ -0.22
TRAIP-202ENST00000469027 CHRNDQ07001 517 aa13.65□□□□□ -0.22
TRAIP-202ENST00000469027 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
TRAIP-202ENST00000469027 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
TRAIP-202ENST00000469027 FASTKD5Q7L8L6 764 aaKnown RBP13.65□□□□□ -0.22
TRAIP-202ENST00000469027 EPHX3Q9H6B9 360 aa13.65□□□□□ -0.22
TRAIP-202ENST00000469027 MYO9BQ13459 2157 aa13.65□□□□□ -0.22
TRAIP-202ENST00000469027 MAST2Q6P0Q8 1798 aa13.64□□□□□ -0.23
TRAIP-202ENST00000469027 TAF5LO75529 589 aa13.64□□□□□ -0.23
TRAIP-202ENST00000469027 TRIB2Q92519 343 aa13.64□□□□□ -0.23
TRAIP-202ENST00000469027 RNPC3Q96LT9 517 aaKnown RBP13.64□□□□□ -0.23
TRAIP-202ENST00000469027 BABAM1Q9NWV8 329 aa13.64□□□□□ -0.23
TRAIP-202ENST00000469027 LTBP2Q14767 1821 aa13.64□□□□□ -0.23
TRAIP-202ENST00000469027 CXCL11O14625 94 aa13.63□□□□□ -0.23
TRAIP-202ENST00000469027 BADQ92934 168 aa13.63□□□□□ -0.23
TRAIP-202ENST00000469027 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
TRAIP-202ENST00000469027 ATP11BQ9Y2G3 1177 aa13.63□□□□□ -0.23
TRAIP-202ENST00000469027 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
TRAIP-202ENST00000469027 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
TRAIP-202ENST00000469027 CYP2B6P20813 491 aa13.62□□□□□ -0.23
TRAIP-202ENST00000469027 ITGA6P23229 1130 aa13.62□□□□□ -0.23
TRAIP-202ENST00000469027 DNAJB2P25686 324 aa13.62□□□□□ -0.23
TRAIP-202ENST00000469027 RTP1P59025 263 aa13.62□□□□□ -0.23
TRAIP-202ENST00000469027 ZNF576Q9H609 170 aa13.62□□□□□ -0.23
TRAIP-202ENST00000469027 AK9Q5TCS8 1911 aa13.61□□□□□ -0.23
TRAIP-202ENST00000469027 A0A0G2JLL6 359 aaPredicted RBP13.61□□□□□ -0.23
TRAIP-202ENST00000469027 FAM86C2PA6NEL3 165 aa13.61□□□□□ -0.23
TRAIP-202ENST00000469027 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
TRAIP-202ENST00000469027 PRRT2Q7Z6L0 340 aaPredicted RBP13.61□□□□□ -0.23
TRAIP-202ENST00000469027 FAM83AQ86UY5 434 aa13.61□□□□□ -0.23
TRAIP-202ENST00000469027 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
TRAIP-202ENST00000469027 IGFBP4P22692 258 aa13.6□□□□□ -0.23
TRAIP-202ENST00000469027 RIPK4P57078 832 aa13.6□□□□□ -0.23
TRAIP-202ENST00000469027 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
TRAIP-202ENST00000469027 MAP3K21Q5TCX8 1036 aa13.6□□□□□ -0.23
TRAIP-202ENST00000469027 C15orf52Q6ZUT6 534 aaKnown RBP13.6□□□□□ -0.23
TRAIP-202ENST00000469027 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
TRAIP-202ENST00000469027 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
TRAIP-202ENST00000469027 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
TRAIP-202ENST00000469027 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
TRAIP-202ENST00000469027 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
TRAIP-202ENST00000469027 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
TRAIP-202ENST00000469027 TIFAQ96CG3 184 aa13.59□□□□□ -0.23
TRAIP-202ENST00000469027 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms