RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 DOK7Q18PE1 504 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 CCDC93Q567U6 631 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 MFSD14BQ5SR56 506 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 DCAF8Q5TAQ9 597 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 SLF2Q8IX21 1173 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 FBXL16Q8N461 479 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 AGXT2Q9BYV1 514 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 NAV1Q8NEY1 1877 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 ARFGEF1Q9Y6D6 1849 aa17.81■□□□□ 0.44
CRAMP1-206ENST00000468839 MROH7-TTC4A0A0A0MT08 1334 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 WDR19Q8NEZ3 1342 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 HAND2P61296 217 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 KIAA2012Q0VF49 1180 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 TOB2Q14106 344 aaPredicted RBP17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 PSMD1Q99460 953 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 CRNKL1Q9BZJ0 848 aaKnown RBP17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 CD2APQ9Y5K6 639 aa17.8■□□□□ 0.44
CRAMP1-206ENST00000468839 ATP8A2Q9NTI2 1148 aa17.79■□□□□ 0.44
CRAMP1-206ENST00000468839 AATFQ9NY61 560 aaKnown RBP eCLIP17.79■□□□□ 0.44
CRAMP1-206ENST00000468839 ANAPC4Q9UJX5 808 aa17.79■□□□□ 0.44
CRAMP1-206ENST00000468839 GAKO14976 1311 aa17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 GPR75-ASB3A0A0A6YYF3 556 aa17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 BAG3O95817 575 aa17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 PTGER2P43116 358 aa17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 TDO2P48775 406 aa17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 NOL8Q76FK4 1167 aaKnown RBP17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 SDR42E1Q8WUS8 393 aa17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 NOL10Q9BSC4 688 aaKnown RBP17.78■□□□□ 0.44
CRAMP1-206ENST00000468839 ECE2O60344 883 aa17.77■□□□□ 0.44
CRAMP1-206ENST00000468839 TRDNQ13061 729 aa17.77■□□□□ 0.44
CRAMP1-206ENST00000468839 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
CRAMP1-206ENST00000468839 Q6ZUG5 572 aa17.77■□□□□ 0.44
CRAMP1-206ENST00000468839 MRIQ9BWK5 157 aa17.77■□□□□ 0.44
CRAMP1-206ENST00000468839 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 PLCG2P16885 1265 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 MCM5P33992 734 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 DIXDC1Q155Q3 683 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 AKNAD1Q5T1N1 836 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 RALYLQ86SE5 291 aaKnown RBP17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 TBC1D10CQ8IV04 446 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 CERS5Q8N5B7 392 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 STAG1Q8WVM7 1258 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 TCEANC2Q96MN5 208 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 CNNM2Q9H8M5 875 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 DBNDD1Q9H9R9 158 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 TPCN1Q9ULQ1 816 aa17.76■□□□□ 0.43
CRAMP1-206ENST00000468839 DDX60LQ5H9U9 1706 aaKnown RBP17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 PPARAQ07869 468 aa17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 ME3Q16798 604 aa17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 AOC3Q16853 763 aa17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 KRT23Q9C075 422 aa17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
CRAMP1-206ENST00000468839 USP17L3A6NCW0 530 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 PPIP5K2O43314 1243 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 LARGE1O95461 756 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 PCP11498 1178 aaKnown RBP17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 EVCP57679 992 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 CTDSPL2Q05D32 466 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 DACT2Q5SW24 774 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 CTR9Q6PD62 1173 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 HHIPL2Q6UWX4 724 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 LARP6Q9BRS8 491 aaKnown RBP17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 MKRN1Q9UHC7 482 aaKnown RBP17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 ADAMTSL1Q8N6G6 1762 aa17.74■□□□□ 0.43
CRAMP1-206ENST00000468839 PRC1O43663 620 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 FGRP09769 529 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 BTDP43251 543 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 ANTXR2P58335 489 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 HDLBPQ00341 1268 aaKnown RBP17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 MFSD6Q6ZSS7 791 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 SH3RF3Q8TEJ3 882 aaPredicted RBP17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 FBXW7Q969H0 707 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 ZNF274Q96GC6 653 aaPredicted RBP17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 KCNQ5Q9NR82 932 aa17.73■□□□□ 0.43
CRAMP1-206ENST00000468839 MYH8P13535 1937 aa17.72■□□□□ 0.43
CRAMP1-206ENST00000468839 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
CRAMP1-206ENST00000468839 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
CRAMP1-206ENST00000468839 USP17L21D6R901 530 aa17.72■□□□□ 0.43
CRAMP1-206ENST00000468839 RHBDL3P58872 404 aa17.72■□□□□ 0.43
CRAMP1-206ENST00000468839 NUCB2P80303 420 aa17.72■□□□□ 0.43
CRAMP1-206ENST00000468839 FGD1P98174 961 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms