RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 FAM9BQ8IZU0 186 aa5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 BHMTQ93088 406 aa5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 DMRTB1Q96MA1 342 aa5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 ANKARQ7Z5J8 1434 aa5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 MYBBP1AQ9BQG0 1328 aaKnown RBP5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 CD163L1Q9NR16 1453 aa5.45□□□□□ -1.54
TMEM39A-204ENST00000468545 CCER2I3L3R5 266 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ADGRB2O60241 1585 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 SIN3BO75182 1162 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 SASH3O75995 380 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 MAP3K6O95382 1288 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ADAMTS2O95450 1211 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 RARAP10276 462 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ADH6P28332 368 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 MST1RQ04912 1400 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 CPSF1Q10570 1443 aaKnown RBP5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 KRT25Q7Z3Z0 450 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 TMC7Q7Z402 723 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 SYT9Q86SS6 491 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ALKBH8Q96BT7 664 aaKnown RBP5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ASB16Q96NS5 453 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ELP3Q9H9T3 547 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 FMN2Q9NZ56 1722 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 ZFATQ9P243 1243 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 GDF2Q9UK05 429 aaPredicted RBP5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 USP32Q8NFA0 1604 aa5.44□□□□□ -1.54
TMEM39A-204ENST00000468545 MYOM1P52179 1685 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 POLR3AO14802 1390 aaPredicted RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 CDC42BPGQ6DT37 1551 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 USP6P35125 1406 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 EDC4Q6P2E9 1401 aaKnown RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 A6NHS1 94 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 GPR182O15218 404 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 IGHA2P01877 340 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 SLURP2P0DP57 97 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 TARSP26639 723 aaKnown RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 MTHFSP49914 203 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 RRS1Q15050 365 aaKnown RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 ZNF385CQ66K41 422 aaPredicted RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 SLCO4C1Q6ZQN7 724 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 SVOPQ8N4V2 548 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 GOLGA6L1Q8N7Z2 621 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 SNX29Q8TEQ0 813 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 WHAMMQ8TF30 809 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 OXCT2Q9BYC2 517 aaPredicted RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 ABI2Q9NYB9 513 aaPredicted RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 LTBP4Q8N2S1 1624 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 XIRP1Q702N8 1843 aaKnown RBP5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 NPHP3Q7Z494 1330 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 TTC21AQ8NDW8 1320 aa5.43□□□□□ -1.54
TMEM39A-204ENST00000468545 PARD3Q8TEW0 1356 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 ERCC3P19447 782 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 SOX18P35713 384 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 AMPHP49418 695 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 PCBP4P57723 403 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 DNAJC14Q6Y2X3 702 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 DHX32Q7L7V1 743 aaKnown RBP5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 TNFRSF25Q93038 417 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 LTV1Q96GA3 475 aaPredicted RBP5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 CFAP53Q96M91 514 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 TMEM63CQ9P1W3 806 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 GGA1Q9UJY5 639 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 ADAMTS8Q9UP79 889 aa5.42□□□□□ -1.54
TMEM39A-204ENST00000468545 DCCP43146 1447 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 ITSN1Q15811 1721 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 NEURL1BA8MQ27 555 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 U2SURPO15042 1029 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 TREHO43280 583 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 MMP20O60882 483 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 TNFRSF21O75509 655 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 NEFLP07196 543 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 PSAPP07602 524 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 HOXD8P13378 290 aaPredicted RBP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 ZC3H6P61129 1189 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 WDR43Q15061 677 aaKnown RBP eCLIP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 TTC39BQ5VTQ0 682 aaPredicted RBP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 FCHSD1Q86WN1 690 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 OR13H1Q8NG92 308 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 UBE2OQ9C0C9 1292 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 LRRC4BQ9NT99 713 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 TLR7Q9NYK1 1049 aaKnown RBP5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 POLKQ9UBT6 870 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 KLF15Q9UIH9 416 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 NSD2O96028 1365 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 NPC1L1Q9UHC9 1359 aa5.41□□□□□ -1.54
TMEM39A-204ENST00000468545 TOPAZ1Q8N9V7 1692 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 ANKRD33BA6NCL7 494 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 ADARB2-AS1A8MUL3 147 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 PHACTR2O75167 634 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 GCP02774 474 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 NRLP54845 237 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 GPLD1P80108 840 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 PLAURQ03405 335 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 FMR1Q06787 632 aaKnown RBP eCLIP5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 DSC3Q14574 896 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 PCSK7Q16549 785 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 KCNH5Q8NCM2 988 aa5.4□□□□□ -1.54
TMEM39A-204ENST00000468545 LRRC59Q96AG4 307 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms