RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 PCDHAC2Q9Y5I4 1007 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 LAMB1P07942 1786 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 TRPA1O75762 1119 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 PSEN1P49768 467 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 SLC10A4Q96EP9 437 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 SSC5DA1L4H1 1573 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
SSR3-205ENST00000467789 ALDH1A1P00352 501 aa12.84□□□□□ -0.35
SSR3-205ENST00000467789 PRKG1Q13976 671 aa12.84□□□□□ -0.35
SSR3-205ENST00000467789 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
SSR3-205ENST00000467789 NBPF12Q5TAG4 269 aaPredicted RBP12.84□□□□□ -0.35
SSR3-205ENST00000467789 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
SSR3-205ENST00000467789 FAM83AQ86UY5 434 aa12.84□□□□□ -0.35
SSR3-205ENST00000467789 ANKRD13AQ8IZ07 590 aa12.84□□□□□ -0.35
SSR3-205ENST00000467789 ZGPATQ8N5A5 531 aaKnown RBP12.84□□□□□ -0.35
SSR3-205ENST00000467789 ABHD8Q96I13 439 aa12.84□□□□□ -0.35
SSR3-205ENST00000467789 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
SSR3-205ENST00000467789 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
SSR3-205ENST00000467789 GRIK5Q16478 980 aa12.83□□□□□ -0.36
SSR3-205ENST00000467789 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
SSR3-205ENST00000467789 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
SSR3-205ENST00000467789 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
SSR3-205ENST00000467789 AOX1Q06278 1338 aa12.83□□□□□ -0.36
SSR3-205ENST00000467789 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
SSR3-205ENST00000467789 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
SSR3-205ENST00000467789 LDHBP07195 334 aaKnown RBP12.82□□□□□ -0.36
SSR3-205ENST00000467789 MVPQ14764 893 aaKnown RBP12.82□□□□□ -0.36
SSR3-205ENST00000467789 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
SSR3-205ENST00000467789 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
SSR3-205ENST00000467789 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
SSR3-205ENST00000467789 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
SSR3-205ENST00000467789 DCBLD2Q96PD2 775 aa12.82□□□□□ -0.36
SSR3-205ENST00000467789 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
SSR3-205ENST00000467789 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
SSR3-205ENST00000467789 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
SSR3-205ENST00000467789 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
SSR3-205ENST00000467789 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
SSR3-205ENST00000467789 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
SSR3-205ENST00000467789 PHKA1P46020 1223 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 TFCP2Q12800 502 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 G3BP1Q13283 466 aaKnown RBP eCLIP12.8□□□□□ -0.36
SSR3-205ENST00000467789 DGKZQ13574 1117 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
SSR3-205ENST00000467789 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 TMEM39BQ9GZU3 492 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 OTOFQ9HC10 1997 aa12.8□□□□□ -0.36
SSR3-205ENST00000467789 STK25O00506 426 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 MS4A1P11836 297 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 PRDX5P30044 214 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 TIMM10P62072 90 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 FAM151AQ8WW52 585 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 XAGE2Q96GT9 111 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 GPR108Q9NPR9 543 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 FZD1Q9UP38 647 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 CSADQ9Y600 493 aa12.79□□□□□ -0.36
SSR3-205ENST00000467789 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 PNMA6EA0A0J9YXQ4 647 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 ADORA1P30542 326 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
SSR3-205ENST00000467789 RASGRF1Q13972 1273 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
SSR3-205ENST00000467789 CTU1Q7Z7A3 348 aaKnown RBP12.78□□□□□ -0.36
SSR3-205ENST00000467789 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.78□□□□□ -0.36
SSR3-205ENST00000467789 SSH3Q8TE77 659 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
SSR3-205ENST00000467789 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
SSR3-205ENST00000467789 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
SSR3-205ENST00000467789 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
SSR3-205ENST00000467789 IGSF3O75054 1194 aa12.77□□□□□ -0.37
SSR3-205ENST00000467789 TBC1D8O95759 1140 aa12.77□□□□□ -0.37
SSR3-205ENST00000467789 CACNB3P54284 484 aa12.77□□□□□ -0.37
SSR3-205ENST00000467789 GORABQ5T7V8 394 aa12.77□□□□□ -0.37
SSR3-205ENST00000467789 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.37
SSR3-205ENST00000467789 DZIP1Q86YF9 867 aaKnown RBP12.77□□□□□ -0.37
SSR3-205ENST00000467789 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.37
SSR3-205ENST00000467789 NEUROD6Q96NK8 337 aa12.77□□□□□ -0.37
SSR3-205ENST00000467789 TTLL13PA6NNM8 815 aa12.76□□□□□ -0.37
SSR3-205ENST00000467789 GPR25O00155 361 aa12.76□□□□□ -0.37
SSR3-205ENST00000467789 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
SSR3-205ENST00000467789 UQCRFS1P1P0C7P4 283 aa12.76□□□□□ -0.37
SSR3-205ENST00000467789 ARID4AP29374 1257 aaPredicted RBP12.76□□□□□ -0.37
SSR3-205ENST00000467789 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
SSR3-205ENST00000467789 ASTLQ6HA08 431 aaPredicted RBP12.76□□□□□ -0.37
SSR3-205ENST00000467789 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
SSR3-205ENST00000467789 ZNF296Q8WUU4 475 aaPredicted RBP12.76□□□□□ -0.37
SSR3-205ENST00000467789 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
SSR3-205ENST00000467789 ELP3Q9H9T3 547 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms