RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 DMRTC2Q8IXT2 367 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-211ENST00000467707 STK35Q8TDR2 534 aa7.88□□□□□ -1.15
GAPVD1-211ENST00000467707 SYNGAP1Q96PV0 1343 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 FAM221AA4D161 298 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 WIPF1O43516 503 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 CILPO75339 1184 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 FGRP09769 529 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 HOXB4P17483 251 aaPredicted RBP7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 MAOBP27338 520 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 SOX9P48436 509 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 RASIP1Q5U651 963 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 FBXO11Q86XK2 927 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 SLITRK4Q8IW52 837 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 WHAMMQ8TF30 809 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 KCNB2Q92953 911 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 NKD1Q969G9 470 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 KLHDC7BQ96G42 594 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.87□□□□□ -1.152e-7■□□□□ 9.2
GAPVD1-211ENST00000467707 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 MKL2Q9ULH7 1088 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 PCDHB5Q9Y5E4 795 aa7.87□□□□□ -1.15
GAPVD1-211ENST00000467707 TM4SF5O14894 197 aa7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 F13A1P00488 732 aa7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 HGSNATQ68CP4 663 aa7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 BNC2Q6ZN30 1099 aaPredicted RBP7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 FMR1NBQ8N0W7 255 aaPredicted RBP7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 GRIN3AQ8TCU5 1115 aa7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 ACSBG1Q96GR2 724 aa7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 UBP1Q9NZI7 540 aa7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 NOP53Q9NZM5 478 aaKnown RBP7.86□□□□□ -1.15
GAPVD1-211ENST00000467707 DEAF1O75398 565 aaPredicted RBP7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 ARHGEF15O94989 841 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 RPL6Q02878 288 aaKnown RBP7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 SEPT6Q14141 434 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 SOGA3Q5TF21 947 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 REXO1Q8N1G1 1221 aaKnown RBP7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 GALNT11Q8NCW6 608 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 JARID2Q92833 1246 aaPredicted RBP7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 USP26Q9BXU7 913 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 EFR3BQ9Y2G0 817 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 TACC3Q9Y6A5 838 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 SNCAIPQ9Y6H5 919 aa7.85□□□□□ -1.15
GAPVD1-211ENST00000467707 A0A0A0MRY4 1105 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 LOC100289279A0A1B0GTE1 492 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 SLFN14P0C7P3 912 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 IMPDH2P12268 514 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 ZNF165P49910 485 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 NLRP12P59046 1061 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 PDE3AQ14432 1141 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 LINC00114Q6XXX2 140 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 REC114Q7Z4M0 266 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 PPP1R1BQ9UD71 204 aaPredicted RBP7.84□□□□□ -1.15
GAPVD1-211ENST00000467707 DLL1O00548 723 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 SSBP05455 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 ELNP15502 786 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 CRKP46108 304 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 NASPP49321 788 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 TRIM28Q13263 835 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 SEZ6Q53EL9 994 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 PRRT3Q5FWE3 981 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 GPBAR1Q8TDU6 330 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 TRIM11Q96F44 468 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 CCDC86Q9H6F5 360 aaKnown RBP7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 GINM1Q9NU53 330 aa7.83□□□□□ -1.16
GAPVD1-211ENST00000467707 DUOXA2Q1HG44 320 aa7.82□□□□□ -1.16
GAPVD1-211ENST00000467707 EXOSC6Q5RKV6 272 aaKnown RBP7.82□□□□□ -1.16
GAPVD1-211ENST00000467707 IGF2-ASQ6U949 168 aa7.82□□□□□ -1.16
GAPVD1-211ENST00000467707 HDXQ7Z353 690 aa7.82□□□□□ -1.16
GAPVD1-211ENST00000467707 BEND7Q8N7W2 519 aaPredicted RBP7.82□□□□□ -1.16
GAPVD1-211ENST00000467707 PCDHA4Q9UN74 947 aa7.82□□□□□ -1.16
GAPVD1-211ENST00000467707 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 ADAM11O75078 769 aa7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 STK10O94804 968 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 GTF2F1P35269 517 aaKnown RBP eCLIP7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 SNRPNP63162 240 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 RBL2Q08999 1139 aa7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 CPLX3Q8WVH0 158 aa7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 ZC3H12CQ9C0D7 883 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 MRPL18Q9H0U6 180 aaKnown RBP7.81□□□□□ -1.16
GAPVD1-211ENST00000467707 TLR3O15455 904 aaKnown RBP7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 ZNF862O60290 1169 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 PTPN11Q06124 597 aaPredicted RBP7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 NBPF6Q5VWK0 638 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 OR6P1Q8NGX9 317 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 FBXO27Q8NI29 283 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 NBPF4Q96M43 638 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 RNF208Q9H0X6 261 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 EHMT1Q9H9B1 1298 aa7.8□□□□□ -1.16
GAPVD1-211ENST00000467707 PRR36Q9H6K5 1346 aa7.79□□□□□ -1.16
GAPVD1-211ENST00000467707 GFRA2O00451 464 aa7.79□□□□□ -1.16
GAPVD1-211ENST00000467707 AOC2O75106 756 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms