RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 MVPQ14764 893 aaKnown RBP17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 ARHGEF6Q15052 776 aa17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
CCHCR1-211ENST00000467553 PDE4DIPQ5VU43 2346 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 WDHD1O75717 1129 aaPredicted RBP17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 GJA5P36382 358 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 SOX10P56693 466 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 GRIK5Q16478 980 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 NEUROD6Q96NK8 337 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 R3HDMLQ9H3Y0 253 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 ELP3Q9H9T3 547 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 ZCCHC17Q9NP64 241 aaKnown RBP17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
CCHCR1-211ENST00000467553 SURF6O75683 361 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 VGLL4Q14135 290 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 POLA2Q14181 598 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 MS4A4AQ96JQ5 239 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 SALL1Q9NSC2 1324 aa17.35■□□□□ 0.37
CCHCR1-211ENST00000467553 ADORA1P30542 326 aa17.34■□□□□ 0.37
CCHCR1-211ENST00000467553 SP3Q02447 781 aa17.34■□□□□ 0.37
CCHCR1-211ENST00000467553 ERO1BQ86YB8 467 aa17.34■□□□□ 0.37
CCHCR1-211ENST00000467553 ZGPATQ8N5A5 531 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-211ENST00000467553 PTPN18Q99952 460 aa17.34■□□□□ 0.37
CCHCR1-211ENST00000467553 A0A1B0GUL7 405 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 CRHR2Q13324 411 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 PDE3AQ14432 1141 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 CEP85Q6P2H3 762 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 OTOP1Q7RTM1 612 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 FAM151AQ8WW52 585 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 XAGE2Q96GT9 111 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 ZFYVE28Q9HCC9 887 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 TRIM17Q9Y577 477 aa17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-211ENST00000467553 PDS5AQ29RF7 1337 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 CETPP11597 493 aa17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 PHKA1P46020 1223 aa17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 ZNF341Q9BYN7 854 aa17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-211ENST00000467553 CCL15-CCL14A0A0B4J2E2 113 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 PPIL2Q13356 520 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 CCL15Q16663 113 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 CDAN1Q8IWY9 1227 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 SLF2Q8IX21 1173 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 WRNIP1Q96S55 665 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 EFCC1Q9HA90 598 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
CCHCR1-211ENST00000467553 CACNB3P54284 484 aa17.3■□□□□ 0.36
CCHCR1-211ENST00000467553 PPATQ06203 517 aa17.3■□□□□ 0.36
CCHCR1-211ENST00000467553 SNAPC2Q13487 334 aa17.3■□□□□ 0.36
CCHCR1-211ENST00000467553 BRI3BPQ8WY22 251 aa17.3■□□□□ 0.36
CCHCR1-211ENST00000467553 OTUD5Q96G74 571 aa17.3■□□□□ 0.36
CCHCR1-211ENST00000467553 PTPN22Q9Y2R2 807 aa17.3■□□□□ 0.36
CCHCR1-211ENST00000467553 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-211ENST00000467553 ZNF112Q9UJU3 913 aa17.29■□□□□ 0.36
CCHCR1-211ENST00000467553 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-211ENST00000467553 DAGLAQ9Y4D2 1042 aa17.29■□□□□ 0.36
CCHCR1-211ENST00000467553 SNCAIPQ9Y6H5 919 aa17.29■□□□□ 0.36
CCHCR1-211ENST00000467553 HTTP42858 3142 aa17.29■□□□□ 0.36
CCHCR1-211ENST00000467553 AK9Q5TCS8 1911 aa17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 SLC34A2O95436 690 aa17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 GNRH1P01148 92 aa17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 PRPF38BQ5VTL8 546 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 RPAP2Q8IXW5 612 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 CD99L2Q8TCZ2 262 aa17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 EXOC6BQ9Y2D4 811 aa17.28■□□□□ 0.36
CCHCR1-211ENST00000467553 TLR2O60603 784 aa17.27■□□□□ 0.36
CCHCR1-211ENST00000467553 PRDX5P30044 214 aa17.27■□□□□ 0.36
CCHCR1-211ENST00000467553 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
CCHCR1-211ENST00000467553 ARMC5Q96C12 935 aa17.27■□□□□ 0.36
CCHCR1-211ENST00000467553 FAM163AQ96GL9 167 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-211ENST00000467553 CENPFP49454 3210 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 IRF6O14896 467 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 ENTPD3O75355 529 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 KIF22Q14807 665 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 TNNI3KQ59H18 835 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 GPR108Q9NPR9 543 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 USP40Q9NVE5 1235 aa17.26■□□□□ 0.35
CCHCR1-211ENST00000467553 FPGT-TNNI3KV9GXZ4 949 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms