RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 PPP2R5AQ15172 486 aa6□□□□□ -1.45
MSH2-205ENST00000467323 TTF1Q15361 905 aaPredicted RBP6□□□□□ -1.45
MSH2-205ENST00000467323 NFE2Q16621 373 aaPredicted RBP6□□□□□ -1.45
MSH2-205ENST00000467323 SCARA3Q6AZY7 606 aa6□□□□□ -1.45
MSH2-205ENST00000467323 TTC6Q86TZ1 520 aa6□□□□□ -1.45
MSH2-205ENST00000467323 TICAM2Q86XR7 235 aa6□□□□□ -1.45
MSH2-205ENST00000467323 CEP120Q8N960 986 aa6□□□□□ -1.45
MSH2-205ENST00000467323 ASAP3Q8TDY4 903 aa6□□□□□ -1.45
MSH2-205ENST00000467323 SPATA9Q9BWV2 254 aa6□□□□□ -1.45
MSH2-205ENST00000467323 EPN3Q9H201 632 aa6□□□□□ -1.45
MSH2-205ENST00000467323 TLR7Q9NYK1 1049 aaKnown RBP6□□□□□ -1.45
MSH2-205ENST00000467323 B2RBV5 119 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 TSPAN6O43657 245 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 PDE8AO60658 829 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 FAM153BP0C7A2 387 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 HOXD8P13378 290 aaPredicted RBP5.99□□□□□ -1.45
MSH2-205ENST00000467323 POU3F3P20264 500 aaPredicted RBP5.99□□□□□ -1.45
MSH2-205ENST00000467323 BMP6P22004 513 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 GNALP38405 381 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 RPL6Q02878 288 aaKnown RBP5.99□□□□□ -1.45
MSH2-205ENST00000467323 FAAP100Q0VG06 881 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 PABPC4Q13310 644 aaKnown RBP eCLIP5.99□□□□□ -1.45
MSH2-205ENST00000467323 MLECQ14165 292 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 HLTFQ14527 1009 aaKnown RBP eCLIP5.99□□□□□ -1.45
MSH2-205ENST00000467323 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 LLGL2Q6P1M3 1020 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 ZBTB38Q8NAP3 1195 aaPredicted RBP5.99□□□□□ -1.45
MSH2-205ENST00000467323 RNF217Q8TC41 542 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 TSR2Q969E8 191 aaKnown RBP5.99□□□□□ -1.45
MSH2-205ENST00000467323 NXPE3Q969Y0 559 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 EMILIN2Q9BXX0 1053 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 MAPRE3Q9UPY8 281 aa5.99□□□□□ -1.45
MSH2-205ENST00000467323 A0A087X0B3 334 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 METTL12A8MUP2 240 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 PDE2AO00408 941 aaPredicted RBP5.98□□□□□ -1.45
MSH2-205ENST00000467323 IRS4O14654 1257 aaPredicted RBP5.98□□□□□ -1.45
MSH2-205ENST00000467323 MAP3K6O95382 1288 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 KRT18P05783 430 aaKnown RBP5.98□□□□□ -1.45
MSH2-205ENST00000467323 ACPPP15309 386 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 FAM50AQ14320 339 aaKnown RBP5.98□□□□□ -1.45
MSH2-205ENST00000467323 EFHC2Q5JST6 749 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 AXDND1Q5T1B0 1012 aaPredicted RBP5.98□□□□□ -1.45
MSH2-205ENST00000467323 KANK3Q6NY19 840 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 FIGNL1Q6PIW4 674 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 RUFY4Q6ZNE9 571 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 TSHZ1Q6ZSZ6 1077 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 ZSCAN1Q8NBB4 408 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 ATL2Q8NHH9 583 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 KIF2CQ99661 725 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 APBA2Q99767 749 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 RUSC1Q9BVN2 902 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 UBA5Q9GZZ9 404 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 COMMD10Q9Y6G5 202 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 WASHC2CQ9Y4E1 1318 aa5.98□□□□□ -1.45
MSH2-205ENST00000467323 TTC24A2A3L6 582 aaPredicted RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 MEIS3P2A8K0S8 358 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 TRPA1O75762 1119 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 RASGRP1O95267 797 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 FAM157BP0CG42 384 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 NFKB1P19838 968 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 GUCY2FP51841 1108 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 FOXC1Q12948 553 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 MAP9Q49MG5 647 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 FNDC3BQ53EP0 1204 aaKnown RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 AKAP4Q5JQC9 854 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 COL13A1Q5TAT6 717 aaPredicted RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 SPRYD7Q5W111 196 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 MRM1Q6IN84 353 aaKnown RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 RNF180Q86T96 592 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 TAB3Q8N5C8 712 aaPredicted RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 FAM126AQ9BYI3 521 aaPredicted RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 CLEC4MQ9H2X3 399 aaPredicted RBP5.97□□□□□ -1.45
MSH2-205ENST00000467323 RUBCNLQ9H714 662 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 ZFATQ9P243 1243 aa5.97□□□□□ -1.45
MSH2-205ENST00000467323 NFKBIEO00221 500 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 AGRPO00253 132 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 PLD2O14939 933 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 GRIN3BO60391 1043 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 F11P03951 625 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 RHOQP17081 205 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 ARNTP27540 789 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 ZNF157P51786 506 aaPredicted RBP5.96□□□□□ -1.46
MSH2-205ENST00000467323 SFSWAPQ12872 951 aaKnown RBP5.96□□□□□ -1.46
MSH2-205ENST00000467323 LAMC2Q13753 1193 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 ZNF697Q5TEC3 545 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 SULF2Q8IWU5 870 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 RAVER1Q8IY67 606 aaKnown RBP5.96□□□□□ -1.46
MSH2-205ENST00000467323 TMEM40Q8WWA1 233 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 GAL3ST3Q96A11 431 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 IPO9Q96P70 1041 aaKnown RBP5.96□□□□□ -1.46
MSH2-205ENST00000467323 PHAXQ9H814 394 aaKnown RBP5.96□□□□□ -1.46
MSH2-205ENST00000467323 CBX8Q9HC52 389 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 GPAMQ9HCL2 828 aa5.96□□□□□ -1.46
MSH2-205ENST00000467323 UPK3BL1B0FP48 263 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms