RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 PROSER3Q2NL68 480 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 BICDL2A1A5D9 508 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
CMC1-205ENST00000466830 KRT40Q6A162 431 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 GNPATO15228 680 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 ZNF75DP51815 510 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 ZNF174Q15697 407 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
CMC1-205ENST00000466830 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
CMC1-205ENST00000466830 V9GY48 417 aaPredicted RBP12.78□□□□□ -0.36
CMC1-205ENST00000466830 PTCH1Q13635 1447 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 ZNF202O95125 648 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 MAP4K1Q92918 833 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 CD2BP2O95400 341 aaKnown RBP12.77□□□□□ -0.36
CMC1-205ENST00000466830 DESP17661 470 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 TNNI2P48788 182 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 KRT83P78385 493 aa12.77□□□□□ -0.36
CMC1-205ENST00000466830 HLTFQ14527 1009 aaKnown RBP eCLIP12.77□□□□□ -0.37
CMC1-205ENST00000466830 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
CMC1-205ENST00000466830 GOLGA6L7A0A1B0GV03 622 aa12.77□□□□□ -0.37
CMC1-205ENST00000466830 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.37
CMC1-205ENST00000466830 SAMM50Q9Y512 469 aa12.77□□□□□ -0.37
CMC1-205ENST00000466830 CTAGE9A4FU28 777 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 PRDM1O75626 825 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 SYT10Q6XYQ8 523 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.76□□□□□ -0.37
CMC1-205ENST00000466830 V9GYY5 206 aaPredicted RBP12.76□□□□□ -0.37
CMC1-205ENST00000466830 UBXN1Q04323 297 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 IFI16Q16666 785 aaKnown RBP12.76□□□□□ -0.37
CMC1-205ENST00000466830 CNGA4Q8IV77 575 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 PHKBQ93100 1093 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
CMC1-205ENST00000466830 USP8P40818 1118 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 TTC6Q86TZ1 520 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 CEP112Q8N8E3 955 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 MYL10Q9BUA6 226 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 KRT86O43790 486 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 HSPD1P10809 573 aaKnown RBP12.76□□□□□ -0.37
CMC1-205ENST00000466830 IFFO1Q0D2I5 559 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 MMRN2Q9H8L6 949 aa12.76□□□□□ -0.37
CMC1-205ENST00000466830 TRMT1LQ7Z2T5 733 aaKnown RBP12.76□□□□□ -0.37
CMC1-205ENST00000466830 PFKFB2O60825 505 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 PARP1P09874 1014 aaKnown RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 CCDC172P0C7W6 258 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 CTDSPL2Q05D32 466 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 CTR9Q6PD62 1173 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 BAG1Q99933 345 aaPredicted RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 LUC7L2Q9Y383 392 aaKnown RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 CTSWP56202 376 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 KIF5AQ12840 1032 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 CALCOCO1Q9P1Z2 691 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 TACC1O75410 805 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 CNBD1Q8NA66 436 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 DBNLQ9UJU6 430 aaKnown RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 PCCAP05165 728 aaPredicted RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 LIG1P18858 919 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 TEX11Q8IYF3 940 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 MLKLQ8NB16 471 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 GPT2Q8TD30 523 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 LZTFL1Q9NQ48 299 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
CMC1-205ENST00000466830 ZBTB38Q8NAP3 1195 aaPredicted RBP12.75□□□□□ -0.37
CMC1-205ENST00000466830 PLCD1P51178 756 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 FANCCQ00597 558 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
CMC1-205ENST00000466830 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
CMC1-205ENST00000466830 NLRP12P59046 1061 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 TUBB4BP68371 445 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 ADALQ6DHV7 355 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
CMC1-205ENST00000466830 KARSQ15046 597 aaKnown RBP12.74□□□□□ -0.37
CMC1-205ENST00000466830 ADCK5Q3MIX3 580 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 PIK3AP1Q6ZUJ8 805 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 PRPF4BQ13523 1007 aaKnown RBP12.74□□□□□ -0.37
CMC1-205ENST00000466830 CUL4AQ13619 759 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 GAS2L3Q86XJ1 694 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 PPP1R9BQ96SB3 815 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 LETM2Q2VYF4 491 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 SPECC1Q5M775 1068 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 PLIN2Q99541 437 aa12.74□□□□□ -0.37
CMC1-205ENST00000466830 WDR66Q8TBY9 1149 aa12.73□□□□□ -0.37
CMC1-205ENST00000466830 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
CMC1-205ENST00000466830 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
CMC1-205ENST00000466830 RNF17Q9BXT8 1623 aaKnown RBP12.73□□□□□ -0.37
CMC1-205ENST00000466830 IMPACTQ9P2X3 320 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms