RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 Q6ZS46 218 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 DZIP1LQ8IYY4 767 aaKnown RBP7.06□□□□□ -1.28
EDEM3-205ENST00000466606 TMEM87AQ8NBN3 555 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 WDR18Q9BV38 432 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 SSBP4Q9BWG4 385 aaPredicted RBP7.06□□□□□ -1.28
EDEM3-205ENST00000466606 BACH2Q9BYV9 841 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 BCL11AQ9H165 835 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 CYP4F12Q9HCS2 524 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 SAMM50Q9Y512 469 aa7.06□□□□□ -1.28
EDEM3-205ENST00000466606 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
EDEM3-205ENST00000466606 AOC2O75106 756 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 ST13P50502 369 aaKnown RBP7.05□□□□□ -1.28
EDEM3-205ENST00000466606 ZNF252P-AS1Q0IIN9 211 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 ANKRD34AQ69YU3 496 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 LLGL2Q6P1M3 1020 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 SMG8Q8ND04 991 aaKnown RBP7.05□□□□□ -1.28
EDEM3-205ENST00000466606 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 EMILIN2Q9BXX0 1053 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 KIAA1522Q9P206 1035 aaPredicted RBP7.05□□□□□ -1.28
EDEM3-205ENST00000466606 AP4E1Q9UPM8 1137 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 TLR6Q9Y2C9 796 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 PCDHB5Q9Y5E4 795 aa7.05□□□□□ -1.28
EDEM3-205ENST00000466606 FURINP09958 794 aa7.04□□□□□ -1.28
EDEM3-205ENST00000466606 ADH5P11766 374 aa7.04□□□□□ -1.28
EDEM3-205ENST00000466606 RBM25P49756 843 aaKnown RBP7.04□□□□□ -1.28
EDEM3-205ENST00000466606 LIG3P49916 1009 aa7.04□□□□□ -1.28
EDEM3-205ENST00000466606 PTPN11Q06124 597 aaPredicted RBP7.04□□□□□ -1.28
EDEM3-205ENST00000466606 ARMC10Q8N2F6 343 aa7.04□□□□□ -1.28
EDEM3-205ENST00000466606 UTP4Q969X6 686 aaKnown RBP7.04□□□□□ -1.28
EDEM3-205ENST00000466606 ACSBG1Q96GR2 724 aa7.04□□□□□ -1.28
EDEM3-205ENST00000466606 FAM46AQ96IP4 442 aaKnown RBP7.04□□□□□ -1.28
EDEM3-205ENST00000466606 PPP1R9AQ9ULJ8 1098 aa7.04□□□□□ -1.28
EDEM3-205ENST00000466606 GAS2O43903 313 aaKnown RBP7.03□□□□□ -1.28
EDEM3-205ENST00000466606 TIAF1O95411 115 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 RECKO95980 971 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 IGHA1P01876 353 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 ITGAEP38570 1179 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 SOX4Q06945 474 aaPredicted RBP7.03□□□□□ -1.28
EDEM3-205ENST00000466606 SEPT6Q14141 434 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 DYMQ7RTS9 669 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 SUGCTQ9HAC7 445 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 COPRSQ9NQ92 184 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 CSADQ9Y600 493 aa7.03□□□□□ -1.28
EDEM3-205ENST00000466606 BMP3P12645 472 aa7.02□□□□□ -1.29
EDEM3-205ENST00000466606 LRRC14Q15048 493 aa7.02□□□□□ -1.29
EDEM3-205ENST00000466606 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
EDEM3-205ENST00000466606 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
EDEM3-205ENST00000466606 C2CD4AQ8NCU7 369 aaPredicted RBP7.02□□□□□ -1.29
EDEM3-205ENST00000466606 NOC4LQ9BVI4 516 aaKnown RBP7.02□□□□□ -1.29
EDEM3-205ENST00000466606 KRT82Q9NSB4 513 aa7.02□□□□□ -1.29
EDEM3-205ENST00000466606 CYP8B1Q9UNU6 501 aa7.02□□□□□ -1.29
EDEM3-205ENST00000466606 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
EDEM3-205ENST00000466606 DCDC2CA8MYV0 355 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 MINDY4BA8MYZ0 360 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 TMPRSS2O15393 492 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 TFE3P19532 575 aaPredicted RBP7.01□□□□□ -1.29
EDEM3-205ENST00000466606 LMNB1P20700 586 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 USP11P51784 963 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 RSPO4Q2I0M5 234 aaPredicted RBP7.01□□□□□ -1.29
EDEM3-205ENST00000466606 KIF4BQ2VIQ3 1234 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.01□□□□□ -1.29
EDEM3-205ENST00000466606 JARID2Q92833 1246 aaPredicted RBP7.01□□□□□ -1.29
EDEM3-205ENST00000466606 KCNF1Q9H3M0 494 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 GGT7Q9UJ14 662 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 PCDHA4Q9UN74 947 aa7.01□□□□□ -1.29
EDEM3-205ENST00000466606 TRIM37O94972 964 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 SLFN14P0C7P3 912 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 RAB6AP20340 208 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 RXRBP28702 533 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 GBP2P32456 591 aaPredicted RBP7□□□□□ -1.29
EDEM3-205ENST00000466606 CDK8P49336 464 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 NKAPLQ5M9Q1 402 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 AGMOQ6ZNB7 445 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 PPP1R3FQ6ZSY5 799 aaPredicted RBP7□□□□□ -1.29
EDEM3-205ENST00000466606 PHC3Q8NDX5 983 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 GAL3ST3Q96A11 431 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 MYRFLQ96LU7 910 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 LGR6Q9HBX8 967 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 FAM105AQ9NUU6 356 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 KBTBD4Q9NVX7 518 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 PCDHGC5Q9Y5F6 944 aa7□□□□□ -1.29
EDEM3-205ENST00000466606 PF4P02776 101 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 ASPAP45381 313 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 RPS26P62854 115 aaKnown RBP6.99□□□□□ -1.29
EDEM3-205ENST00000466606 ID3Q02535 119 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 FAM160A1Q05DH4 1040 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 INPP5AQ14642 412 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 C9orf131Q5VYM1 1079 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 C12orf40Q86WS4 652 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 RELL1Q8IUW5 271 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 FANCD2OSQ96PS1 177 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 CACNA2D2Q9NY47 1150 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
EDEM3-205ENST00000466606 DHX15O43143 795 aaKnown RBP6.98□□□□□ -1.29
EDEM3-205ENST00000466606 VAMP1P23763 118 aa6.98□□□□□ -1.29
EDEM3-205ENST00000466606 MAP4P27816 1152 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms