RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CRKP46108 304 aa18.85■□□□□ 0.61
HMGXB4-206ENST00000466438 FAM109BQ6ICB4 259 aaPredicted RBP18.85■□□□□ 0.61
HMGXB4-206ENST00000466438 KSR2Q6VAB6 950 aa18.85■□□□□ 0.61
HMGXB4-206ENST00000466438 KCNH4Q9UQ05 1017 aa18.85■□□□□ 0.61
HMGXB4-206ENST00000466438 EYSQ5T1H1 3165 aa18.84■□□□□ 0.61
HMGXB4-206ENST00000466438 PI4KAP2A4QPH2 592 aa18.84■□□□□ 0.61
HMGXB4-206ENST00000466438 NEURL1BA8MQ27 555 aa18.84■□□□□ 0.61
HMGXB4-206ENST00000466438 MOGSQ13724 837 aa18.84■□□□□ 0.61
HMGXB4-206ENST00000466438 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
HMGXB4-206ENST00000466438 PI4KAP1Q8N8J0 262 aa18.84■□□□□ 0.61
HMGXB4-206ENST00000466438 POTEB2H3BUK9 544 aa18.83■□□□□ 0.6
HMGXB4-206ENST00000466438 DCAF15Q66K64 600 aa18.83■□□□□ 0.6
HMGXB4-206ENST00000466438 ANKRD18BA2A2Z9 1011 aa18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 CACNB3P54284 484 aa18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 FAM83AQ86UY5 434 aa18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 NBPF3Q9H094 633 aa18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.82■□□□□ 0.6
HMGXB4-206ENST00000466438 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
HMGXB4-206ENST00000466438 CYP2C8P10632 490 aa18.81■□□□□ 0.6
HMGXB4-206ENST00000466438 COL9A1P20849 921 aa18.81■□□□□ 0.6
HMGXB4-206ENST00000466438 INPP5BP32019 993 aa18.81■□□□□ 0.6
HMGXB4-206ENST00000466438 TDRD7Q8NHU6 1098 aaKnown RBP18.81■□□□□ 0.6
HMGXB4-206ENST00000466438 ZNF341Q9BYN7 854 aa18.81■□□□□ 0.6
HMGXB4-206ENST00000466438 COL2A1P02458 1487 aaPredicted RBP18.8■□□□□ 0.6
HMGXB4-206ENST00000466438 TNPO2O14787 897 aaKnown RBP18.8■□□□□ 0.6
HMGXB4-206ENST00000466438 CCDC30Q5VVM6 783 aa18.8■□□□□ 0.6
HMGXB4-206ENST00000466438 CHMP4AQ9BY43 222 aa18.8■□□□□ 0.6
HMGXB4-206ENST00000466438 TMOD2Q9NZR1 351 aa18.8■□□□□ 0.6
HMGXB4-206ENST00000466438 LAMA2P24043 3122 aaKnown RBP18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 CASP7P55210 303 aa18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 HDLBPQ00341 1268 aaKnown RBP18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 GPAT2Q6NUI2 795 aa18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 C11orf49Q9H6J7 331 aa18.79■□□□□ 0.6
HMGXB4-206ENST00000466438 DDX60LQ5H9U9 1706 aaKnown RBP18.78■□□□□ 0.6
HMGXB4-206ENST00000466438 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
HMGXB4-206ENST00000466438 FAM161BQ96MY7 647 aa18.78■□□□□ 0.6
HMGXB4-206ENST00000466438 PRUNE2Q8WUY3 3088 aa18.78■□□□□ 0.6
HMGXB4-206ENST00000466438 TTC28Q96AY4 2481 aa18.78■□□□□ 0.6
HMGXB4-206ENST00000466438 GCKRQ14397 625 aa18.77■□□□□ 0.6
HMGXB4-206ENST00000466438 MIGA2Q7L4E1 593 aa18.77■□□□□ 0.6
HMGXB4-206ENST00000466438 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.6
HMGXB4-206ENST00000466438 ZNF112Q9UJU3 913 aa18.77■□□□□ 0.6
HMGXB4-206ENST00000466438 TAOK2Q9UL54 1235 aa18.77■□□□□ 0.6
HMGXB4-206ENST00000466438 CXCL11O14625 94 aa18.76■□□□□ 0.59
HMGXB4-206ENST00000466438 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
HMGXB4-206ENST00000466438 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
HMGXB4-206ENST00000466438 TEKT1Q969V4 418 aa18.76■□□□□ 0.59
HMGXB4-206ENST00000466438 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
HMGXB4-206ENST00000466438 HIBADHP31937 336 aaKnown RBP18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 GRIK5Q16478 980 aa18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 ZNF697Q5TEC3 545 aa18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 C8orf58Q8NAV2 365 aa18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 MAFAQ8NHW3 353 aaPredicted RBP18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 COA7Q96BR5 231 aa18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 ZDHHC15Q96MV8 337 aa18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 MUC3AQ02505 3323 aa18.75■□□□□ 0.59
HMGXB4-206ENST00000466438 PLIN1O60240 522 aa18.74■□□□□ 0.59
HMGXB4-206ENST00000466438 HMGCRP04035 888 aa18.74■□□□□ 0.59
HMGXB4-206ENST00000466438 GYG1P46976 350 aa18.74■□□□□ 0.59
HMGXB4-206ENST00000466438 FASTKD5Q7L8L6 764 aaKnown RBP18.74■□□□□ 0.59
HMGXB4-206ENST00000466438 SLC45A1Q9Y2W3 748 aa18.74■□□□□ 0.59
HMGXB4-206ENST00000466438 GNAI1P63096 354 aa18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 FAM84BQ96KN1 310 aaPredicted RBP18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 CDX2Q99626 313 aaPredicted RBP18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 HMX1Q9NP08 348 aaPredicted RBP18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 OGDHLQ9ULD0 1010 aa18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 PFASO15067 1338 aa18.73■□□□□ 0.59
HMGXB4-206ENST00000466438 A0A0G2JLL6 359 aaPredicted RBP18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 MDM2Q00987 491 aaPredicted RBP18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 UBE4AQ14139 1066 aa18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 APOBEC3HQ6NTF7 200 aaKnown RBP18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 PRRT2Q7Z6L0 340 aaPredicted RBP18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 SMCR8Q8TEV9 937 aaPredicted RBP18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 TBC1D22AQ8WUA7 517 aa18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 MRIQ9BWK5 157 aa18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
HMGXB4-206ENST00000466438 LDHAL6AQ6ZMR3 332 aa18.71■□□□□ 0.59
HMGXB4-206ENST00000466438 PLA2G5P39877 138 aa18.7■□□□□ 0.58
HMGXB4-206ENST00000466438 FOXO4P98177 505 aa18.7■□□□□ 0.58
HMGXB4-206ENST00000466438 DOCK3Q8IZD9 2030 aa18.7■□□□□ 0.58
HMGXB4-206ENST00000466438 FAM151AQ8WW52 585 aa18.7■□□□□ 0.58
HMGXB4-206ENST00000466438 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
HMGXB4-206ENST00000466438 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
HMGXB4-206ENST00000466438 CALD1Q05682 793 aaKnown RBP18.69■□□□□ 0.58
HMGXB4-206ENST00000466438 TAF7LQ5H9L4 462 aa18.69■□□□□ 0.58
HMGXB4-206ENST00000466438 MAST3O60307 1309 aa18.69■□□□□ 0.58
HMGXB4-206ENST00000466438 COL6A1P12109 1028 aa18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 FAM110CQ1W6H9 321 aa18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 CCDC57Q2TAC2 916 aa18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 GADL1Q6ZQY3 521 aa18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
HMGXB4-206ENST00000466438 LINS1Q8NG48 757 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms