RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 USP28Q96RU2 1077 aa7.97□□□□□ -1.13
CDHR3-204ENST00000466351 CNNM1Q9NRU3 951 aa7.97□□□□□ -1.13
CDHR3-204ENST00000466351 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
CDHR3-204ENST00000466351 ORC3Q9UBD5 711 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-204ENST00000466351 ZNF652Q9Y2D9 606 aa7.97□□□□□ -1.13
CDHR3-204ENST00000466351 NHSQ6T4R5 1651 aa7.97□□□□□ -1.13
CDHR3-204ENST00000466351 ZNF804BA4D1E1 1349 aa7.97□□□□□ -1.13
CDHR3-204ENST00000466351 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.13
CDHR3-204ENST00000466351 UQCRHLA0A096LP55 91 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 PATL2C9JE40 543 aaKnown RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 SPTLC2O15270 562 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 NRDCO43847 1150 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 UQCRHP07919 91 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 ADORA1P30542 326 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 ME1P48163 572 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 METAP2P50579 478 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 ANTXR2P58335 489 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 KIF23Q02241 960 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 SLC39A14Q15043 492 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 CCDC152Q4G0S7 254 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 SLC9C2Q5TAH2 1124 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 CCDC102BQ68D86 513 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 SYNE3Q6ZMZ3 975 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 JARID2Q92833 1246 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 FAM89AQ96GI7 184 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 STRBPQ96SI9 672 aaKnown RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 NACAP1Q9BZK3 213 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 PUS7LQ9H0K6 701 aaKnown RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 GREM2Q9H772 168 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 STRN4Q9NRL3 753 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 BTG4Q9NY30 223 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 TFIP11Q9UBB9 837 aaKnown RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 TRMT112Q9UI30 125 aaKnown RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 ANAPC4Q9UJX5 808 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 ZBTB1Q9Y2K1 713 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 R3HCC1Q9Y3T6 440 aaKnown RBP7.96□□□□□ -1.14
CDHR3-204ENST00000466351 UBN2Q6ZU65 1347 aa7.96□□□□□ -1.14
CDHR3-204ENST00000466351 LY75O60449 1722 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 BMP15O95972 392 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 IFNAR1P17181 557 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 HSPA2P54652 639 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 SCARF1Q14162 830 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 STK38Q15208 465 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 ZRSR1Q15695 479 aaKnown RBP7.95□□□□□ -1.14
CDHR3-204ENST00000466351 ANO1Q5XXA6 986 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 LUZP1Q86V48 1076 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 FSIP1Q8NA03 581 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 SPATA5Q8NB90 893 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 CCDC150Q8NCX0 1101 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 AIDAQ96BJ3 306 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 DDX11Q96FC9 970 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 CCDC34Q96HJ3 373 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 UTP14AQ9BVJ6 771 aaKnown RBP7.95□□□□□ -1.14
CDHR3-204ENST00000466351 TRIM5Q9C035 493 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 OSBPL5Q9H0X9 879 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-204ENST00000466351 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.95□□□□□ -1.14
CDHR3-204ENST00000466351 KIAA1468Q9P260 1216 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 HOOK1Q9UJC3 728 aaKnown RBP7.95□□□□□ -1.14
CDHR3-204ENST00000466351 HPSEQ9Y251 543 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 PAXBP1Q9Y5B6 917 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 NDUFB9Q9Y6M9 179 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 NEDD4P46934 1319 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 SPATA31A1Q5TZJ5 1347 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 LTBP4Q8N2S1 1624 aa7.95□□□□□ -1.14
CDHR3-204ENST00000466351 TNRC6CQ9HCJ0 1690 aaKnown RBP7.95□□□□□ -1.14
CDHR3-204ENST00000466351 SMTNL1A8MU46 457 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 BECN2A8MW95 431 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 ZBTB43O43298 467 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CCP110O43303 1012 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CTIFO43310 598 aaKnown RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CUTAO60888 179 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 IGHMBP2P38935 993 aaKnown RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 TRIM29Q14134 588 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 UBE4AQ14139 1066 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 HLFQ16534 295 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 AXDND1Q5T1B0 1012 aaPredicted RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 AKNAD1Q5T1N1 836 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 FAM173BQ6P4H8 233 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CKAP2LQ8IYA6 745 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 ZNF579Q8NAF0 562 aaKnown RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 IGDCC4Q8TDY8 1250 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 SLC4A9Q96Q91 983 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 NBPF3Q9H094 633 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 NAPBQ9H115 298 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 DNAJC25Q9H1X3 360 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 FOXP1Q9H334 677 aaPredicted RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 KCNF1Q9H3M0 494 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 NCOA5Q9HCD5 579 aaKnown RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 GNL3LQ9NVN8 582 aaKnown RBP7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CLIP2Q9UDT6 1046 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 TUBE1Q9UJT0 475 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 PCDHA7Q9UN72 937 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CEP131Q9UPN4 1083 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 THSD7AQ9UPZ6 1657 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 CNTNAP4Q9C0A0 1308 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 ZNF532Q9HCE3 1301 aa7.94□□□□□ -1.14
CDHR3-204ENST00000466351 AP5Z1O43299 807 aa7.93□□□□□ -1.14
CDHR3-204ENST00000466351 CAMTA2O94983 1202 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms