RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PIK3C2AO00443 1686 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 KCNA3P22001 575 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 NOS2P35228 1153 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 EPHA4P54764 986 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 TEAD4Q15561 434 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 AMIGO3Q86WK7 504 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 WWC1Q8IX03 1113 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 IP6K1Q92551 441 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 LTV1Q96GA3 475 aaPredicted RBP8.36□□□□□ -1.07
NCL-208ENST00000466274 MARK1Q9P0L2 795 aa8.36□□□□□ -1.07
NCL-208ENST00000466274 NFAT5O94916 1531 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
NCL-208ENST00000466274 SH3PXD2AQ5TCZ1 1133 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 SAMD5Q5TGI4 173 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
NCL-208ENST00000466274 SLC9A9Q8IVB4 645 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 RAPGEF4Q8WZA2 1011 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 ZNF232Q9UNY5 417 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 RTCBQ9Y3I0 505 aaKnown RBP8.35□□□□□ -1.07
NCL-208ENST00000466274 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
NCL-208ENST00000466274 KTN1Q86UP2 1357 aaKnown RBP8.35□□□□□ -1.07
NCL-208ENST00000466274 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 C1QTNF9BB2RNN3 333 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 PIK3R2O00459 728 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 EFSO43281 561 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 RAD21O60216 631 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 FURINP09958 794 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 SIK1P57059 783 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 DEFB115Q30KQ5 88 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.34□□□□□ -1.07
NCL-208ENST00000466274 C7orf43Q8WVR3 580 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 GCC1Q96CN9 775 aa8.34□□□□□ -1.07
NCL-208ENST00000466274 AVENQ9NQS1 362 aaPredicted RBP8.34□□□□□ -1.07
NCL-208ENST00000466274 TUBGCP6Q96RT7 1819 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 PCDH11XQ9BZA7 1347 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 PCDH11YQ9BZA8 1340 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 IQCA1LA6NCM1 817 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 K7ELQ4 463 aaPredicted RBP8.33□□□□□ -1.08
NCL-208ENST00000466274 EML1O00423 815 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 RFC4P35249 363 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 LINC00116Q8NCU8 138 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 TPCN2Q8NHX9 752 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 KIAA1024Q9UPX6 916 aa8.33□□□□□ -1.08
NCL-208ENST00000466274 TNRC6CQ9HCJ0 1690 aaKnown RBP8.33□□□□□ -1.08
NCL-208ENST00000466274 WDR33Q9C0J8 1336 aaKnown RBP8.32□□□□□ -1.08
NCL-208ENST00000466274 LY75O60449 1722 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 CLDN10P78369 228 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 LAMC2Q13753 1193 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 LDHDQ86WU2 507 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 NEUROD4Q9HD90 331 aa8.32□□□□□ -1.08
NCL-208ENST00000466274 PASKQ96RG2 1323 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 SERTM1A2A2V5 107 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 RASSF10A6NK89 507 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 CA12O43570 354 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 ECE1P42892 770 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 CHRNA4P43681 627 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 AMPHP49418 695 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 SFSWAPQ12872 951 aaKnown RBP8.31□□□□□ -1.08
NCL-208ENST00000466274 CCDC102BQ68D86 513 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 SYT9Q86SS6 491 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 MCOLN1Q9GZU1 580 aa8.31□□□□□ -1.08
NCL-208ENST00000466274 NOP53Q9NZM5 478 aaKnown RBP8.31□□□□□ -1.08
NCL-208ENST00000466274 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
NCL-208ENST00000466274 KIAA1210Q9ULL0 1709 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 GYS1P13807 737 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 NME9Q86XW9 330 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 PIGBQ92521 554 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 UCN2Q96RP3 112 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 PLVAPQ9BX97 442 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
NCL-208ENST00000466274 ABT1Q9ULW3 272 aaKnown RBP8.3□□□□□ -1.08
NCL-208ENST00000466274 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 KAT6BQ8WYB5 2073 aa8.3□□□□□ -1.08
NCL-208ENST00000466274 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
NCL-208ENST00000466274 CHRNA5P30532 468 aa8.29□□□□□ -1.08
NCL-208ENST00000466274 HDGFL2Q7Z4V5 671 aaPredicted RBP8.29□□□□□ -1.08
NCL-208ENST00000466274 PLEKHM2Q8IWE5 1019 aa8.29□□□□□ -1.08
NCL-208ENST00000466274 TTLL6Q8N841 843 aa8.29□□□□□ -1.08
NCL-208ENST00000466274 SLC30A3Q99726 388 aa8.29□□□□□ -1.08
NCL-208ENST00000466274 C5P01031 1676 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 QRICH2Q9H0J4 1663 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
NCL-208ENST00000466274 ELOA3DA6NLF2 546 aaPredicted RBP8.28□□□□□ -1.08
NCL-208ENST00000466274 HOXC9P31274 260 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 ELOA3BQ3SY89 546 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 ELOA3Q8NG57 546 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 RHPN1Q8TCX5 695 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
NCL-208ENST00000466274 MAP3K19Q56UN5 1328 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms