RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 CCDC129Q6ZRS4 1044 aa13.61□□□□□ -0.23
CSF3R-208ENST00000466138 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
CSF3R-208ENST00000466138 ERO1BQ86YB8 467 aa13.61□□□□□ -0.23
CSF3R-208ENST00000466138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSF3R-208ENST00000466138 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
CSF3R-208ENST00000466138 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.6□□□□□ -0.23
CSF3R-208ENST00000466138 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.6□□□□□ -0.23
CSF3R-208ENST00000466138 TLL1O43897 1013 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 EPHB4P54760 987 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 STRIP1Q5VSL9 837 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 FAM9BQ8IZU0 186 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 COA7Q96BR5 231 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 PRMT6Q96LA8 375 aaPredicted RBP13.6□□□□□ -0.23
CSF3R-208ENST00000466138 PARK7Q99497 189 aaKnown RBP13.6□□□□□ -0.23
CSF3R-208ENST00000466138 SEC31BQ9NQW1 1179 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 FAM86C1Q9NVL1 165 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 RALYQ9UKM9 306 aaKnown RBP13.6□□□□□ -0.23
CSF3R-208ENST00000466138 KCNH4Q9UQ05 1017 aa13.6□□□□□ -0.23
CSF3R-208ENST00000466138 DLG5Q8TDM6 1919 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 RGS20O76081 388 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 RBM5P52756 815 aaKnown RBP eCLIP13.59□□□□□ -0.23
CSF3R-208ENST00000466138 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 TTLL5Q6EMB2 1281 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 CNTNAP3BQ96NU0 1288 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 CNTNAP3Q9BZ76 1288 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 KCNH6Q9H252 994 aa13.59□□□□□ -0.23
CSF3R-208ENST00000466138 GTF2IP78347 998 aa13.58□□□□□ -0.24
CSF3R-208ENST00000466138 PPIL2Q13356 520 aa13.58□□□□□ -0.24
CSF3R-208ENST00000466138 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
CSF3R-208ENST00000466138 LRRC37A2A6NM11 1700 aa13.58□□□□□ -0.24
CSF3R-208ENST00000466138 U2SURPO15042 1029 aaKnown RBP13.57□□□□□ -0.24
CSF3R-208ENST00000466138 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
CSF3R-208ENST00000466138 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
CSF3R-208ENST00000466138 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
CSF3R-208ENST00000466138 WRNIP1Q96S55 665 aa13.57□□□□□ -0.24
CSF3R-208ENST00000466138 TMEM39BQ9GZU3 492 aa13.57□□□□□ -0.24
CSF3R-208ENST00000466138 C5orf42Q9H799 3197 aa13.57□□□□□ -0.24
CSF3R-208ENST00000466138 MAST2Q6P0Q8 1798 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 MED19A0JLT2 244 aaPredicted RBP13.56□□□□□ -0.24
CSF3R-208ENST00000466138 TCP10L2B9ZVM9 353 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 ERC2O15083 957 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
CSF3R-208ENST00000466138 MCM10Q7L590 875 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 PRSS33Q8NF86 280 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 PBX4Q9BYU1 374 aa13.56□□□□□ -0.24
CSF3R-208ENST00000466138 BSDC1Q9NW68 430 aaPredicted RBP13.56□□□□□ -0.24
CSF3R-208ENST00000466138 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
CSF3R-208ENST00000466138 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
CSF3R-208ENST00000466138 ID4P47928 161 aa13.55□□□□□ -0.24
CSF3R-208ENST00000466138 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
CSF3R-208ENST00000466138 TRIB2Q92519 343 aa13.55□□□□□ -0.24
CSF3R-208ENST00000466138 CCDC85AQ96PX6 553 aaPredicted RBP13.55□□□□□ -0.24
CSF3R-208ENST00000466138 TRIM43BA6NCK2 446 aa13.54□□□□□ -0.24
CSF3R-208ENST00000466138 ANXA1P04083 346 aa13.54□□□□□ -0.24
CSF3R-208ENST00000466138 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
CSF3R-208ENST00000466138 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-208ENST00000466138 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-208ENST00000466138 TRIM43Q96BQ3 446 aaPredicted RBP13.54□□□□□ -0.24
CSF3R-208ENST00000466138 RUNDC1Q96C34 613 aa13.54□□□□□ -0.24
CSF3R-208ENST00000466138 TEPSINQ96N21 525 aa13.54□□□□□ -0.24
CSF3R-208ENST00000466138 XDHP47989 1333 aa13.54□□□□□ -0.24
CSF3R-208ENST00000466138 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
CSF3R-208ENST00000466138 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
CSF3R-208ENST00000466138 PHACTR3Q96KR7 559 aa13.53□□□□□ -0.24
CSF3R-208ENST00000466138 PNNQ9H307 717 aaKnown RBP13.53□□□□□ -0.24
CSF3R-208ENST00000466138 CYP2B6P20813 491 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 PRKAR2BP31323 418 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 MOGSQ13724 837 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
CSF3R-208ENST00000466138 HFE2Q6ZVN8 426 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 TXNRD3Q86VQ6 643 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 ANKRD13CQ8N6S4 541 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 DNAH12Q6ZR08 3092 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 REV3LO60673 3130 aa13.52□□□□□ -0.25
CSF3R-208ENST00000466138 SOWAHBA6NEL2 793 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 MMP14P50281 582 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 TRIM60Q495X7 471 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 LHX8Q68G74 356 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 GPAT2Q6NUI2 795 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 GJD3Q8N144 294 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
CSF3R-208ENST00000466138 NKX2-4Q9H2Z4 354 aa13.51□□□□□ -0.25
CSF3R-208ENST00000466138 TDRD3Q9H7E2 651 aaKnown RBP13.51□□□□□ -0.25
CSF3R-208ENST00000466138 ALADP13716 330 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 PPATQ06203 517 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 TNFAIP1Q13829 316 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 IER5LQ5T953 404 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 COA1Q9GZY4 146 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 PDLIM7Q9NR12 457 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 ZNF70Q9UC06 446 aaPredicted RBP13.5□□□□□ -0.25
CSF3R-208ENST00000466138 JAG2Q9Y219 1238 aa13.5□□□□□ -0.25
CSF3R-208ENST00000466138 MED23Q9ULK4 1368 aa13.49□□□□□ -0.25
CSF3R-208ENST00000466138 PLXNA1Q9UIW2 1896 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms