RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 FOXN1O15353 648 aa11.84□□□□□ -0.51
ATG3-203ENST00000465980 CELF2O95319 508 aaKnown RBP11.84□□□□□ -0.51
ATG3-203ENST00000465980 CST9Q5W186 159 aa11.84□□□□□ -0.51
ATG3-203ENST00000465980 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
ATG3-203ENST00000465980 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
ATG3-203ENST00000465980 THSD7BQ9C0I4 1608 aa11.84□□□□□ -0.51
ATG3-203ENST00000465980 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
ATG3-203ENST00000465980 GDF9O60383 454 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 ITGA6P23229 1130 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 ATP2B4P23634 1241 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 PDE3AQ14432 1141 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 ZKSCAN2Q63HK3 967 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 CYP4F22Q6NT55 531 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 DLK2Q6UY11 383 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 USP48Q86UV5 1035 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 DPF2Q92785 391 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 MINPP1Q9UNW1 487 aa11.83□□□□□ -0.52
ATG3-203ENST00000465980 WDR33Q9C0J8 1336 aaKnown RBP11.83□□□□□ -0.52
ATG3-203ENST00000465980 CASP8AP2Q9UKL3 1982 aa11.82□□□□□ -0.52
ATG3-203ENST00000465980 IPO8O15397 1037 aaKnown RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 CASP7P55210 303 aa11.82□□□□□ -0.52
ATG3-203ENST00000465980 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
ATG3-203ENST00000465980 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 SPSB2Q99619 263 aa11.82□□□□□ -0.52
ATG3-203ENST00000465980 BSDC1Q9NW68 430 aaPredicted RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 DAXXQ9UER7 740 aaPredicted RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 CHMP3Q9Y3E7 222 aa11.82□□□□□ -0.52
ATG3-203ENST00000465980 ASTN2O75129 1339 aaPredicted RBP11.82□□□□□ -0.52
ATG3-203ENST00000465980 MED23Q9ULK4 1368 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 VIL1P09327 827 aaKnown RBP11.81□□□□□ -0.52
ATG3-203ENST00000465980 MS4A1P11836 297 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
ATG3-203ENST00000465980 KIF4BQ2VIQ3 1234 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 C20orf194Q5TEA3 1177 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 KRT26Q7Z3Y9 468 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 MPHOSPH8Q99549 860 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 PGAP2Q9UHJ9 254 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
ATG3-203ENST00000465980 TLL2Q9Y6L7 1015 aa11.81□□□□□ -0.52
ATG3-203ENST00000465980 AOC2O75106 756 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 KLRK1P26718 216 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
ATG3-203ENST00000465980 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 PLA2G12BQ9BX93 195 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 GGA3Q9NZ52 723 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 AKAP11Q9UKA4 1901 aa11.8□□□□□ -0.52
ATG3-203ENST00000465980 USP17L3A6NCW0 530 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 USP17L4A6NCW7 530 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 GPR37O15354 613 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 TRIM27P14373 513 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 ECE1P42892 770 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 KCNJ4P48050 445 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 CTCFP49711 727 aaPredicted RBP11.79□□□□□ -0.52
ATG3-203ENST00000465980 PUS10Q3MIT2 529 aaKnown RBP11.79□□□□□ -0.52
ATG3-203ENST00000465980 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 USP17L1Q7RTZ2 530 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 SAPCD2Q86UD0 394 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 HELBQ8NG08 1087 aaPredicted RBP11.79□□□□□ -0.52
ATG3-203ENST00000465980 DCPSQ96C86 337 aaKnown RBP11.79□□□□□ -0.52
ATG3-203ENST00000465980 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 MXD3Q9BW11 206 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 ECM29Q5VYK3 1845 aa11.79□□□□□ -0.52
ATG3-203ENST00000465980 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 SNAP23O00161 211 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 CSF1RP07333 972 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 LBX1P52954 281 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 FOXO4P98177 505 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 CHRNDQ07001 517 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 LMBR1LQ6UX01 489 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 DZIP1LQ8IYY4 767 aaKnown RBP11.78□□□□□ -0.52
ATG3-203ENST00000465980 AGBL3Q8NEM8 1001 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 EXOC6Q8TAG9 804 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 C9orf78Q9NZ63 289 aaPredicted RBP11.78□□□□□ -0.52
ATG3-203ENST00000465980 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 PTPRCP08575 1304 aa11.78□□□□□ -0.52
ATG3-203ENST00000465980 ZNF609O15014 1411 aa11.77□□□□□ -0.52
ATG3-203ENST00000465980 GRM8O00222 908 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 USP17L8P0C7I0 530 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 HUNKP57058 714 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 ZNF280AP59817 542 aaPredicted RBP11.77□□□□□ -0.53
ATG3-203ENST00000465980 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
ATG3-203ENST00000465980 IFIT5Q13325 482 aaKnown RBP11.77□□□□□ -0.53
ATG3-203ENST00000465980 SCARF1Q14162 830 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 TAF7LQ5H9L4 462 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 MORN1Q5T089 497 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 PODNQ7Z5L7 613 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
ATG3-203ENST00000465980 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms