RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 BEND3Q5T5X7 828 aa9.56□□□□□ -0.88
VPS8-218ENST00000465818 INTS3Q68E01 1043 aaKnown RBP9.56□□□□□ -0.88
VPS8-218ENST00000465818 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
VPS8-218ENST00000465818 PURBQ96QR8 312 aaKnown RBP9.56□□□□□ -0.88
VPS8-218ENST00000465818 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
VPS8-218ENST00000465818 ZNF652Q9Y2D9 606 aa9.56□□□□□ -0.88
VPS8-218ENST00000465818 FCF1Q9Y324 198 aaKnown RBP9.56□□□□□ -0.88
VPS8-218ENST00000465818 COL11A2P13942 1736 aaPredicted RBP9.56□□□□□ -0.88
VPS8-218ENST00000465818 UBN2Q6ZU65 1347 aa9.56□□□□□ -0.88
VPS8-218ENST00000465818 CACNA1SQ13698 1873 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 NEURL1BA8MQ27 555 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 SH3BP2P78314 561 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 HSP90AB3PQ58FF7 597 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 BPHLQ86WA6 291 aaPredicted RBP9.55□□□□□ -0.88
VPS8-218ENST00000465818 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 LINS1Q8NG48 757 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 IGSF5Q9NSI5 407 aa9.55□□□□□ -0.88
VPS8-218ENST00000465818 KIAA1522Q9P206 1035 aaPredicted RBP9.55□□□□□ -0.88
VPS8-218ENST00000465818 CARMIL3Q8ND23 1372 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 IBTKQ9P2D0 1353 aaPredicted RBP9.54□□□□□ -0.88
VPS8-218ENST00000465818 GYS1P13807 737 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 TCIRG1Q13488 830 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 TBC1D9BQ66K14 1250 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 MSL1Q68DK7 614 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 EXOC6Q8TAG9 804 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 MEIS3Q99687 375 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 ISCA1Q9BUE6 129 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 PDGFDQ9GZP0 370 aaPredicted RBP9.54□□□□□ -0.88
VPS8-218ENST00000465818 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
VPS8-218ENST00000465818 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS8-218ENST00000465818 ABCC12Q96J65 1359 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 ALDH1L1O75891 902 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 SCTRP47872 440 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 ZNF211Q13398 564 aaPredicted RBP9.53□□□□□ -0.88
VPS8-218ENST00000465818 R3HDM1Q15032 1099 aaKnown RBP9.53□□□□□ -0.88
VPS8-218ENST00000465818 CLEC4GQ6UXB4 293 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 NLRP10Q86W26 655 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 TRMT44Q8IYL2 757 aaKnown RBP9.53□□□□□ -0.88
VPS8-218ENST00000465818 ZNF34Q8IZ26 560 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 ANO2Q9NQ90 1003 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 CWC25Q9NXE8 425 aaPredicted RBP9.53□□□□□ -0.88
VPS8-218ENST00000465818 SEPT3Q9UH03 358 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 PCDHB11Q9Y5F2 797 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 KIF13BQ9NQT8 1826 aa9.53□□□□□ -0.88
VPS8-218ENST00000465818 A0A1B0GUL6 1792 aa9.52□□□□□ -0.88
VPS8-218ENST00000465818 DLEC1Q9Y238 1755 aa9.52□□□□□ -0.88
VPS8-218ENST00000465818 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 GRM8O00222 908 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 TAF1P21675 1872 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 GCKRQ14397 625 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 NFIXQ14938 502 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 AGERQ15109 404 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 NYAP1Q6ZVC0 841 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 UBE3BQ7Z3V4 1068 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
VPS8-218ENST00000465818 CCDC191Q8NCU4 936 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 LRP5O75197 1615 aa9.52□□□□□ -0.89
VPS8-218ENST00000465818 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
VPS8-218ENST00000465818 NTSR2O95665 410 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 WEE1P30291 646 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
VPS8-218ENST00000465818 DDR1Q08345 913 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
VPS8-218ENST00000465818 NPAS4Q8IUM7 802 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
VPS8-218ENST00000465818 USP44Q9H0E7 712 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 C9orf78Q9NZ63 289 aaPredicted RBP9.51□□□□□ -0.89
VPS8-218ENST00000465818 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
VPS8-218ENST00000465818 STAU1O95793 577 aaKnown RBP9.5□□□□□ -0.89
VPS8-218ENST00000465818 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
VPS8-218ENST00000465818 UBTFL1P0CB47 393 aaPredicted RBP9.5□□□□□ -0.89
VPS8-218ENST00000465818 PTPN5P54829 565 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 RNF20Q5VTR2 975 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 SUSD4Q5VX71 490 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 TRMT112Q9UI30 125 aaKnown RBP9.5□□□□□ -0.89
VPS8-218ENST00000465818 COL4A1P02462 1669 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 UTYO14607 1347 aa9.5□□□□□ -0.89
VPS8-218ENST00000465818 RIC1Q4ADV7 1423 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 POLRMTO00411 1230 aaKnown RBP9.49□□□□□ -0.89
VPS8-218ENST00000465818 ICMTO60725 284 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 PCCAP05165 728 aaPredicted RBP9.49□□□□□ -0.89
VPS8-218ENST00000465818 GNAI3P08754 354 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 MMP10P09238 476 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 ZNF16P17020 682 aaPredicted RBP9.49□□□□□ -0.89
VPS8-218ENST00000465818 CASP7P55210 303 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 SKOR1P84550 965 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 USP4Q13107 963 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 PPP1R42Q7Z4L9 355 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
VPS8-218ENST00000465818 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
VPS8-218ENST00000465818 ZBTB38Q8NAP3 1195 aaPredicted RBP9.49□□□□□ -0.89
VPS8-218ENST00000465818 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
VPS8-218ENST00000465818 FAM89AQ96GI7 184 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms