RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 NWD2Q9ULI1 1742 aa22.65■■□□□ 1.22
SDF4-205ENST00000465727 MAP3K15Q6ZN16 1313 aa22.65■■□□□ 1.22
SDF4-205ENST00000465727 TUBB2AQ13885 445 aa22.65■■□□□ 1.22
SDF4-205ENST00000465727 SHC4Q6S5L8 630 aa22.65■■□□□ 1.22
SDF4-205ENST00000465727 FAM177A1Q8N128 213 aaPredicted RBP22.65■■□□□ 1.22
SDF4-205ENST00000465727 TUBB2BQ9BVA1 445 aa22.65■■□□□ 1.22
SDF4-205ENST00000465727 INTS13Q9NVM9 706 aa22.65■■□□□ 1.22
SDF4-205ENST00000465727 HOOK1Q9UJC3 728 aaKnown RBP22.65■■□□□ 1.22
SDF4-205ENST00000465727 PRC1O43663 620 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 PDE4CQ08493 712 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 PNOCQ13519 176 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 CCDC102BQ68D86 513 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 TC2NQ8N9U0 490 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 EPC1Q9H2F5 836 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 EFCC1Q9HA90 598 aa22.64■■□□□ 1.22
SDF4-205ENST00000465727 MARCKSP29966 332 aaPredicted RBP22.64■■□□□ 1.21
SDF4-205ENST00000465727 MB21D2Q8IYB1 491 aaPredicted RBP22.64■■□□□ 1.21
SDF4-205ENST00000465727 NFATC2IPQ8NCF5 419 aa22.64■■□□□ 1.21
SDF4-205ENST00000465727 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.64■■□□□ 1.21
SDF4-205ENST00000465727 SCN11AQ9UI33 1791 aa22.63■■□□□ 1.21
SDF4-205ENST00000465727 ACTN2P35609 894 aa22.63■■□□□ 1.21
SDF4-205ENST00000465727 PTPAQ15257 358 aa22.63■■□□□ 1.21
SDF4-205ENST00000465727 NEUROD6Q96NK8 337 aa22.63■■□□□ 1.21
SDF4-205ENST00000465727 DACH1Q9UI36 760 aa22.63■■□□□ 1.21
SDF4-205ENST00000465727 MYO1CO00159 1063 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 CUTAO60888 179 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 IVLP07476 585 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 LRP10Q7Z4F1 713 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 METTL16Q86W50 562 aaKnown RBP22.62■■□□□ 1.21
SDF4-205ENST00000465727 NCOA7Q8NI08 942 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 DHX58Q96C10 678 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 A0A087WZG4 1122 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 CDKL5O76039 1030 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 ZFYP08048 801 aaPredicted RBP22.62■■□□□ 1.21
SDF4-205ENST00000465727 IFIT1P09914 478 aaKnown RBP22.62■■□□□ 1.21
SDF4-205ENST00000465727 IL15P40933 162 aaPredicted RBP22.62■■□□□ 1.21
SDF4-205ENST00000465727 USP5P45974 858 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 CASP7P55210 303 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 GOLGA8FQ08AF8 430 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 GOLGA8DPQ0D2H9 430 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 TTLL5Q6EMB2 1281 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 TOGARAM2Q6ZUX3 1019 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 SRGAP1Q7Z6B7 1085 aa22.62■■□□□ 1.21
SDF4-205ENST00000465727 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
SDF4-205ENST00000465727 M0R2C6 588 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 EIF3JO75822 258 aaKnown RBP22.61■■□□□ 1.21
SDF4-205ENST00000465727 CHMP4BP1P59074 171 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 ATG9AQ7Z3C6 839 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 VPS37DQ86XT2 251 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 CEP112Q8N8E3 955 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 CNNM3Q8NE01 707 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 CCDC12Q8WUD4 166 aaPredicted RBP22.61■■□□□ 1.21
SDF4-205ENST00000465727 ERLIN1O75477 346 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 CCDC175P0C221 793 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 ZNF18P17022 549 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 LMAN1P49257 510 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 HDXQ7Z353 690 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 SRLQ86TD4 932 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 PDILTQ8N807 584 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 RAB21Q9UL25 225 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 PCDHA5Q9Y5H7 936 aa22.61■■□□□ 1.21
SDF4-205ENST00000465727 CPDO75976 1380 aa22.6■■□□□ 1.21
SDF4-205ENST00000465727 KCNA6P17658 529 aa22.6■■□□□ 1.21
SDF4-205ENST00000465727 LMBR1LQ6UX01 489 aa22.6■■□□□ 1.21
SDF4-205ENST00000465727 LEKR1Q6ZMV7 388 aa22.6■■□□□ 1.21
SDF4-205ENST00000465727 RALYLQ86SE5 291 aaKnown RBP22.6■■□□□ 1.21
SDF4-205ENST00000465727 ENOX1Q8TC92 643 aaKnown RBP22.6■■□□□ 1.21
SDF4-205ENST00000465727 MAP3K14Q99558 947 aa22.6■■□□□ 1.21
SDF4-205ENST00000465727 NAA15Q9BXJ9 866 aaKnown RBP22.6■■□□□ 1.21
SDF4-205ENST00000465727 SLC52A2Q9HAB3 445 aa22.6■■□□□ 1.21
SDF4-205ENST00000465727 CTR9Q6PD62 1173 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 ARHGEF25Q86VW2 580 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 MLKLQ8NB16 471 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 PANX2Q96RD6 677 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 KCNH3Q9ULD8 1083 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 ZMYM6O95789 1325 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 H3BQF6 201 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 RPS6KA5O75582 802 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 TNNT3P45378 269 aaPredicted RBP22.59■■□□□ 1.21
SDF4-205ENST00000465727 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
SDF4-205ENST00000465727 MSANTD4Q8NCY6 345 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 OSBP2Q969R2 916 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 ALG1Q9BT22 464 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 GJB4Q9NTQ9 266 aa22.59■■□□□ 1.21
SDF4-205ENST00000465727 KIF1AQ12756 1690 aa22.58■■□□□ 1.21
SDF4-205ENST00000465727 TUBBP07437 444 aa22.58■■□□□ 1.21
SDF4-205ENST00000465727 ANTXR2P58335 489 aa22.58■■□□□ 1.2
SDF4-205ENST00000465727 LONRF3Q496Y0 759 aa22.58■■□□□ 1.2
SDF4-205ENST00000465727 BEND6Q5SZJ8 279 aaPredicted RBP22.58■■□□□ 1.2
SDF4-205ENST00000465727 NT5DC1Q5TFE4 455 aa22.58■■□□□ 1.2
SDF4-205ENST00000465727 CPLX2Q6PUV4 134 aaKnown RBP22.58■■□□□ 1.2
SDF4-205ENST00000465727 FOXP4Q8IVH2 680 aaPredicted RBP22.58■■□□□ 1.2
SDF4-205ENST00000465727 TRIML1Q8N9V2 468 aa22.58■■□□□ 1.2
SDF4-205ENST00000465727 RAI14Q9P0K7 980 aa22.58■■□□□ 1.2
SDF4-205ENST00000465727 TIMM10P62072 90 aa22.57■■□□□ 1.2
SDF4-205ENST00000465727 KRT40Q6A162 431 aa22.57■■□□□ 1.2
SDF4-205ENST00000465727 ATG3Q9NT62 314 aa22.57■■□□□ 1.2
SDF4-205ENST00000465727 CDC23Q9UJX2 597 aa22.57■■□□□ 1.2
SDF4-205ENST00000465727 CCDC9Q9Y3X0 531 aaKnown RBP22.57■■□□□ 1.2
SDF4-205ENST00000465727 NFE2L3Q9Y4A8 694 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms