RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PPP4R2Q9NY27 417 aa10.05□□□□□ -0.8
SMC4-205ENST00000465563 FAM170BA6NMN3 283 aa10.04□□□□□ -0.8
SMC4-205ENST00000465563 ZNF157P51786 506 aaPredicted RBP10.04□□□□□ -0.8
SMC4-205ENST00000465563 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
SMC4-205ENST00000465563 NLRP2Q9NX02 1062 aa10.04□□□□□ -0.8
SMC4-205ENST00000465563 FAAP100Q0VG06 881 aa10.03□□□□□ -0.8
SMC4-205ENST00000465563 DTHD1Q6ZMT9 781 aa10.03□□□□□ -0.8
SMC4-205ENST00000465563 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
SMC4-205ENST00000465563 CCDC39Q9UFE4 941 aa10.03□□□□□ -0.8
SMC4-205ENST00000465563 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
SMC4-205ENST00000465563 PRNPP04156 253 aa10.02□□□□□ -0.81
SMC4-205ENST00000465563 TMC7Q7Z402 723 aa10.02□□□□□ -0.81
SMC4-205ENST00000465563 KRTAP4-12Q9BQ66 201 aa10.02□□□□□ -0.81
SMC4-205ENST00000465563 GNEQ9Y223 722 aaKnown RBP10.02□□□□□ -0.81
SMC4-205ENST00000465563 LIG1P18858 919 aa10.01□□□□□ -0.81
SMC4-205ENST00000465563 FCGRTP55899 365 aa10.01□□□□□ -0.81
SMC4-205ENST00000465563 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMC4-205ENST00000465563 VSIG10LQ86VR7 867 aa10.01□□□□□ -0.81
SMC4-205ENST00000465563 CCDC86Q9H6F5 360 aaKnown RBP10.01□□□□□ -0.81
SMC4-205ENST00000465563 BSDC1Q9NW68 430 aaPredicted RBP10.01□□□□□ -0.81
SMC4-205ENST00000465563 DCTN4Q9UJW0 460 aa10.01□□□□□ -0.81
SMC4-205ENST00000465563 DAGLAQ9Y4D2 1042 aa10.01□□□□□ -0.81
SMC4-205ENST00000465563 SLFN14P0C7P3 912 aa10□□□□□ -0.81
SMC4-205ENST00000465563 PPP2R3AQ06190 1150 aa10□□□□□ -0.81
SMC4-205ENST00000465563 SEZ6L2Q6UXD5 910 aa10□□□□□ -0.81
SMC4-205ENST00000465563 ZNF765Q7L2R6 523 aa10□□□□□ -0.81
SMC4-205ENST00000465563 ZC3H12CQ9C0D7 883 aaKnown RBP10□□□□□ -0.81
SMC4-205ENST00000465563 C1GALT1Q9NS00 363 aa10□□□□□ -0.81
SMC4-205ENST00000465563 ADGRE2Q9UHX3 823 aa10□□□□□ -0.81
SMC4-205ENST00000465563 TMPRSS2O15393 492 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 BRD1O95696 1058 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 GSTP1P09211 210 aaKnown RBP9.99□□□□□ -0.81
SMC4-205ENST00000465563 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
SMC4-205ENST00000465563 PI16Q6UXB8 463 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 ABI1Q8IZP0 508 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 WDR89Q96FK6 387 aaPredicted RBP9.99□□□□□ -0.81
SMC4-205ENST00000465563 FBXL18Q96ME1 805 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 LRRC4CQ9HCJ2 640 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 TMEM39AQ9NV64 488 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 CRIM1Q9NZV1 1036 aa9.99□□□□□ -0.81
SMC4-205ENST00000465563 GPN3Q9UHW5 284 aaPredicted RBP9.99□□□□□ -0.81
SMC4-205ENST00000465563 DYNC1LI2O43237 492 aaPredicted RBP9.98□□□□□ -0.81
SMC4-205ENST00000465563 TXKP42681 527 aa9.98□□□□□ -0.81
SMC4-205ENST00000465563 BCO2Q9BYV7 579 aa9.98□□□□□ -0.81
SMC4-205ENST00000465563 ATXN3LQ9H3M9 355 aa9.98□□□□□ -0.81
SMC4-205ENST00000465563 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
SMC4-205ENST00000465563 LGR6Q9HBX8 967 aa9.98□□□□□ -0.81
SMC4-205ENST00000465563 KRT82Q9NSB4 513 aa9.98□□□□□ -0.81
SMC4-205ENST00000465563 ZNF862O60290 1169 aa9.97□□□□□ -0.81
SMC4-205ENST00000465563 PLCB3Q01970 1234 aa9.97□□□□□ -0.81
SMC4-205ENST00000465563 ID3Q02535 119 aa9.97□□□□□ -0.81
SMC4-205ENST00000465563 OGFOD3Q6PK18 319 aa9.97□□□□□ -0.81
SMC4-205ENST00000465563 FMNL2Q96PY5 1086 aa9.97□□□□□ -0.81
SMC4-205ENST00000465563 GOLGA2P5Q9HBQ8 144 aa9.97□□□□□ -0.81
SMC4-205ENST00000465563 MAPK1P28482 360 aa9.96□□□□□ -0.82
SMC4-205ENST00000465563 DSC3Q14574 896 aa9.96□□□□□ -0.82
SMC4-205ENST00000465563 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.82
SMC4-205ENST00000465563 TP53INP2Q8IXH6 220 aa9.96□□□□□ -0.82
SMC4-205ENST00000465563 FANCD2OSQ96PS1 177 aa9.96□□□□□ -0.82
SMC4-205ENST00000465563 ZC3H7BQ9UGR2 993 aaKnown RBP9.96□□□□□ -0.82
SMC4-205ENST00000465563 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMC4-205ENST00000465563 PNMA6FA0A0J9YX94 578 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 TREHO43280 583 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 ENOX2Q16206 610 aaKnown RBP9.94□□□□□ -0.82
SMC4-205ENST00000465563 CYP27C1Q4G0S4 372 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 NFXL1Q6ZNB6 911 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 PDZD3Q86UT5 571 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 KCNB2Q92953 911 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 DISC1Q9NRI5 854 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 AKAP2Q9Y2D5 859 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 RNF114Q9Y508 228 aa9.94□□□□□ -0.82
SMC4-205ENST00000465563 NXPE4Q6UWF7 544 aa9.93□□□□□ -0.82
SMC4-205ENST00000465563 KRTAP1-3Q8IUG1 177 aa9.93□□□□□ -0.82
SMC4-205ENST00000465563 SULF2Q8IWU5 870 aa9.93□□□□□ -0.82
SMC4-205ENST00000465563 SMYD4Q8IYR2 804 aaPredicted RBP9.93□□□□□ -0.82
SMC4-205ENST00000465563 FLCNQ8NFG4 579 aa9.93□□□□□ -0.82
SMC4-205ENST00000465563 PCDHGC5Q9Y5F6 944 aa9.93□□□□□ -0.82
SMC4-205ENST00000465563 LCE3BQ5TA77 95 aa9.92□□□□□ -0.82
SMC4-205ENST00000465563 ARNTP27540 789 aa9.91□□□□□ -0.82
SMC4-205ENST00000465563 CDK5R2Q13319 367 aa9.91□□□□□ -0.82
SMC4-205ENST00000465563 AGBL5Q8NDL9 886 aa9.91□□□□□ -0.82
SMC4-205ENST00000465563 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.82
SMC4-205ENST00000465563 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
SMC4-205ENST00000465563 TTLL4Q14679 1199 aa9.9□□□□□ -0.82
SMC4-205ENST00000465563 KRTAP19-1Q8IUB9 90 aa9.9□□□□□ -0.82
SMC4-205ENST00000465563 STK35Q8TDR2 534 aa9.9□□□□□ -0.82
SMC4-205ENST00000465563 EMILIN2Q9BXX0 1053 aa9.9□□□□□ -0.82
SMC4-205ENST00000465563 NME2P22392 152 aa9.89□□□□□ -0.83
SMC4-205ENST00000465563 CBLL1Q75N03 491 aa9.89□□□□□ -0.83
SMC4-205ENST00000465563 PAK6Q9NQU5 681 aaPredicted RBP9.89□□□□□ -0.83
SMC4-205ENST00000465563 PCOLCE2Q9UKZ9 415 aa9.89□□□□□ -0.83
SMC4-205ENST00000465563 HCLS1P14317 486 aaPredicted RBP9.88□□□□□ -0.83
SMC4-205ENST00000465563 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
SMC4-205ENST00000465563 FBF1Q8TES7 1133 aa9.88□□□□□ -0.83
SMC4-205ENST00000465563 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
SMC4-205ENST00000465563 SLC5A6Q9Y289 635 aa9.88□□□□□ -0.83
SMC4-205ENST00000465563 GSTT1P30711 240 aa9.87□□□□□ -0.83
SMC4-205ENST00000465563 ZSCAN29Q8IWY8 852 aaPredicted RBP9.87□□□□□ -0.83
SMC4-205ENST00000465563 STK11IPQ8N1F8 1099 aa9.87□□□□□ -0.83
SMC4-205ENST00000465563 C3orf58Q8NDZ4 430 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms