RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
APP-213ENST00000464867 STRIP1Q5VSL9 837 aa12.3□□□□□ -0.44
APP-213ENST00000464867 ZNF428Q96B54 188 aa12.3□□□□□ -0.44
APP-213ENST00000464867 RNF208Q9H0X6 261 aa12.3□□□□□ -0.44
APP-213ENST00000464867 MTMR10Q9NXD2 777 aa12.3□□□□□ -0.44
APP-213ENST00000464867 XDHP47989 1333 aa12.3□□□□□ -0.44
APP-213ENST00000464867 MYO1BO43795 1136 aa12.29□□□□□ -0.44
APP-213ENST00000464867 BMP8BP34820 402 aa12.29□□□□□ -0.44
APP-213ENST00000464867 GTF2A2P52657 109 aa12.29□□□□□ -0.44
APP-213ENST00000464867 UBXN2AP68543 259 aa12.29□□□□□ -0.44
APP-213ENST00000464867 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
APP-213ENST00000464867 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
APP-213ENST00000464867 LRP10Q7Z4F1 713 aa12.29□□□□□ -0.44
APP-213ENST00000464867 UBE2Q1Q7Z7E8 422 aa12.29□□□□□ -0.44
APP-213ENST00000464867 RAET1EQ8TD07 263 aa12.29□□□□□ -0.44
APP-213ENST00000464867 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
APP-213ENST00000464867 OPTNQ96CV9 577 aa12.29□□□□□ -0.44
APP-213ENST00000464867 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
APP-213ENST00000464867 MXD3Q9BW11 206 aa12.29□□□□□ -0.44
APP-213ENST00000464867 CCL15-CCL14A0A0B4J2E2 113 aa12.28□□□□□ -0.44
APP-213ENST00000464867 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
APP-213ENST00000464867 ANXA1P04083 346 aa12.28□□□□□ -0.44
APP-213ENST00000464867 CCL5P13501 91 aa12.28□□□□□ -0.44
APP-213ENST00000464867 CAPN2P17655 700 aa12.28□□□□□ -0.44
APP-213ENST00000464867 GRK4P32298 578 aa12.28□□□□□ -0.44
APP-213ENST00000464867 PTGDRQ13258 359 aa12.28□□□□□ -0.44
APP-213ENST00000464867 DLGAP5Q15398 846 aa12.28□□□□□ -0.44
APP-213ENST00000464867 CCL15Q16663 113 aa12.28□□□□□ -0.44
APP-213ENST00000464867 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
APP-213ENST00000464867 HELBQ8NG08 1087 aaPredicted RBP12.28□□□□□ -0.44
APP-213ENST00000464867 TLR2O60603 784 aa12.27□□□□□ -0.45
APP-213ENST00000464867 GJA5P36382 358 aa12.27□□□□□ -0.45
APP-213ENST00000464867 PROSER3Q2NL68 480 aa12.27□□□□□ -0.45
APP-213ENST00000464867 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
APP-213ENST00000464867 KIAA0825Q8IV33 1275 aa12.27□□□□□ -0.45
APP-213ENST00000464867 U2AF1L4Q8WU68 220 aaKnown RBP12.27□□□□□ -0.45
APP-213ENST00000464867 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
APP-213ENST00000464867 ELP3Q9H9T3 547 aa12.27□□□□□ -0.45
APP-213ENST00000464867 USP2O75604 605 aaPredicted RBP12.26□□□□□ -0.45
APP-213ENST00000464867 PPP4CP60510 307 aa12.26□□□□□ -0.45
APP-213ENST00000464867 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
APP-213ENST00000464867 TTLL5Q6EMB2 1281 aa12.26□□□□□ -0.45
APP-213ENST00000464867 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
APP-213ENST00000464867 BRI3BPQ8WY22 251 aa12.26□□□□□ -0.45
APP-213ENST00000464867 COA1Q9GZY4 146 aa12.26□□□□□ -0.45
APP-213ENST00000464867 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
APP-213ENST00000464867 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
APP-213ENST00000464867 RPTORQ8N122 1335 aa12.26□□□□□ -0.45
APP-213ENST00000464867 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
APP-213ENST00000464867 VCANP13611 3396 aa12.25□□□□□ -0.45
APP-213ENST00000464867 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
APP-213ENST00000464867 TFRCP02786 760 aaKnown RBP12.25□□□□□ -0.45
APP-213ENST00000464867 GDF15Q99988 308 aa12.25□□□□□ -0.45
APP-213ENST00000464867 SRRDQ9UH36 339 aa12.25□□□□□ -0.45
APP-213ENST00000464867 TSPYL4Q9UJ04 414 aa12.25□□□□□ -0.45
APP-213ENST00000464867 MED23Q9ULK4 1368 aa12.25□□□□□ -0.45
APP-213ENST00000464867 ZNF804BA4D1E1 1349 aa12.24□□□□□ -0.45
APP-213ENST00000464867 ATP5J2-PTCD1G3V325 749 aa12.24□□□□□ -0.45
APP-213ENST00000464867 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
APP-213ENST00000464867 SGPL1O95470 568 aa12.24□□□□□ -0.45
APP-213ENST00000464867 COL4A1P02462 1669 aa12.24□□□□□ -0.45
APP-213ENST00000464867 NBPF12Q5TAG4 269 aaPredicted RBP12.24□□□□□ -0.45
APP-213ENST00000464867 ECM29Q5VYK3 1845 aa12.24□□□□□ -0.45
APP-213ENST00000464867 TDHQ8IZJ6 230 aa12.24□□□□□ -0.45
APP-213ENST00000464867 FAM43AQ8N2R8 423 aa12.24□□□□□ -0.45
APP-213ENST00000464867 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
APP-213ENST00000464867 SYMPKQ92797 1274 aaKnown RBP12.24□□□□□ -0.45
APP-213ENST00000464867 ZBED3Q96IU2 234 aaPredicted RBP12.24□□□□□ -0.45
APP-213ENST00000464867 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
APP-213ENST00000464867 VEZTQ9HBM0 779 aa12.24□□□□□ -0.45
APP-213ENST00000464867 ZCCHC17Q9NP64 241 aaKnown RBP12.24□□□□□ -0.45
APP-213ENST00000464867 ZSWIM8A7E2V4 1837 aa12.23□□□□□ -0.45
APP-213ENST00000464867 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
APP-213ENST00000464867 CETPP11597 493 aa12.23□□□□□ -0.45
APP-213ENST00000464867 PSMC4P43686 418 aa12.23□□□□□ -0.45
APP-213ENST00000464867 CSADQ9Y600 493 aa12.23□□□□□ -0.45
APP-213ENST00000464867 MYPNQ86TC9 1320 aa12.22□□□□□ -0.45
APP-213ENST00000464867 TTC28Q96AY4 2481 aa12.21□□□□□ -0.45
APP-213ENST00000464867 IRS2Q9Y4H2 1338 aa12.21□□□□□ -0.45
APP-213ENST00000464867 CLRN2A0PK11 232 aa12.21□□□□□ -0.45
APP-213ENST00000464867 GTF2IP78347 998 aa12.21□□□□□ -0.45
APP-213ENST00000464867 KCNC4Q03721 635 aa12.21□□□□□ -0.45
APP-213ENST00000464867 TNFAIP1Q13829 316 aa12.21□□□□□ -0.45
APP-213ENST00000464867 SWT1Q5T5J6 900 aaKnown RBP12.21□□□□□ -0.45
APP-213ENST00000464867 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
APP-213ENST00000464867 ZBTB38Q8NAP3 1195 aaPredicted RBP12.21□□□□□ -0.45
APP-213ENST00000464867 MTMR14Q8NCE2 650 aa12.21□□□□□ -0.45
APP-213ENST00000464867 FAM122AQ96E09 287 aa12.21□□□□□ -0.45
APP-213ENST00000464867 CDC5LQ99459 802 aaKnown RBP12.21□□□□□ -0.45
APP-213ENST00000464867 UBE2OQ9C0C9 1292 aaKnown RBP12.21□□□□□ -0.45
APP-213ENST00000464867 OTOFQ9HC10 1997 aa12.2□□□□□ -0.46
APP-213ENST00000464867 RNF40O75150 1001 aa12.2□□□□□ -0.46
APP-213ENST00000464867 CCT4P50991 539 aaKnown RBP12.2□□□□□ -0.46
APP-213ENST00000464867 TRIM28Q13263 835 aaKnown RBP12.2□□□□□ -0.46
APP-213ENST00000464867 RASA3Q14644 834 aa12.2□□□□□ -0.46
APP-213ENST00000464867 C7orf61Q8IZ16 206 aa12.2□□□□□ -0.46
APP-213ENST00000464867 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
APP-213ENST00000464867 UNC93B1Q9H1C4 597 aa12.2□□□□□ -0.46
APP-213ENST00000464867 ZMYND8Q9ULU4 1186 aaPredicted RBP12.2□□□□□ -0.46
APP-213ENST00000464867 PDE8AO60658 829 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms