RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 CSADQ9Y600 493 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 RPAP1Q9BWH6 1393 aaPredicted RBP18.05■□□□□ 0.48
ALMS1-202ENST00000464408 BCAR3O75815 825 aa18.05■□□□□ 0.48
ALMS1-202ENST00000464408 TCP10Q12799 353 aa18.05■□□□□ 0.48
ALMS1-202ENST00000464408 FAM43AQ8N2R8 423 aa18.05■□□□□ 0.48
ALMS1-202ENST00000464408 BRCA2P51587 3418 aa18.05■□□□□ 0.48
ALMS1-202ENST00000464408 SPDYE5A6NIY4 337 aa18.04■□□□□ 0.48
ALMS1-202ENST00000464408 TRIM27P14373 513 aa18.04■□□□□ 0.48
ALMS1-202ENST00000464408 TIMM10P62072 90 aa18.04■□□□□ 0.48
ALMS1-202ENST00000464408 CCDC102BQ68D86 513 aa18.04■□□□□ 0.48
ALMS1-202ENST00000464408 OTUD7BQ6GQQ9 843 aa18.04■□□□□ 0.48
ALMS1-202ENST00000464408 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
ALMS1-202ENST00000464408 DOCK2Q92608 1830 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 SRGAP3O43295 1099 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 LDHBP07195 334 aaKnown RBP18.03■□□□□ 0.48
ALMS1-202ENST00000464408 INPP5BP32019 993 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 GTF2A2P52657 109 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 TFCP2Q12800 502 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 RASGRF1Q13972 1273 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 GNL3LQ9NVN8 582 aaKnown RBP18.03■□□□□ 0.48
ALMS1-202ENST00000464408 FAM198AQ9UFP1 575 aa18.03■□□□□ 0.48
ALMS1-202ENST00000464408 SALL1Q9NSC2 1324 aa18.02■□□□□ 0.48
ALMS1-202ENST00000464408 KIAA0100Q14667 2235 aaKnown RBP18.02■□□□□ 0.48
ALMS1-202ENST00000464408 TAF1CQ15572 869 aaPredicted RBP18.02■□□□□ 0.48
ALMS1-202ENST00000464408 FAM151AQ8WW52 585 aa18.02■□□□□ 0.48
ALMS1-202ENST00000464408 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.48
ALMS1-202ENST00000464408 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
ALMS1-202ENST00000464408 ERO1AQ96HE7 468 aa18.02■□□□□ 0.48
ALMS1-202ENST00000464408 DENND2AQ9ULE3 1009 aa18.02■□□□□ 0.48
ALMS1-202ENST00000464408 A0A1B0GUL7 405 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 IRF6O14896 467 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 GNAI3P08754 354 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 SP3Q02447 781 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 MTX1Q13505 466 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 ERO1BQ86YB8 467 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 ZNF341Q9BYN7 854 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 USP40Q9NVE5 1235 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 PTPN22Q9Y2R2 807 aa18.01■□□□□ 0.47
ALMS1-202ENST00000464408 MKI67P46013 3256 aaKnown RBP18.01■□□□□ 0.47
ALMS1-202ENST00000464408 SEMA3EO15041 775 aa18■□□□□ 0.47
ALMS1-202ENST00000464408 DCAF15Q66K64 600 aa18■□□□□ 0.47
ALMS1-202ENST00000464408 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
ALMS1-202ENST00000464408 XAGE2Q96GT9 111 aa18■□□□□ 0.47
ALMS1-202ENST00000464408 HDAC5Q9UQL6 1122 aa18■□□□□ 0.47
ALMS1-202ENST00000464408 PNMA6EA0A0J9YXQ4 647 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 BTBD19C9JJ37 291 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 PPIL2Q13356 520 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 EFCC1Q9HA90 598 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 RFX7Q2KHR2 1363 aa17.99■□□□□ 0.47
ALMS1-202ENST00000464408 GAKO14976 1311 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 POTEFA5A3E0 1075 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 CETPP11597 493 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 RGS3P49796 1198 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 PI16Q6UXB8 463 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 SH3BP5LQ7L8J4 393 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.98■□□□□ 0.47
ALMS1-202ENST00000464408 ZNF384Q8TF68 577 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 HOOK2Q96ED9 719 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 ARHGAP39Q9C0H5 1083 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 ABCF2Q9UG63 623 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 ZNF112Q9UJU3 913 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
ALMS1-202ENST00000464408 RBBP6Q7Z6E9 1792 aaKnown RBP17.98■□□□□ 0.47
ALMS1-202ENST00000464408 SNAPC2Q13487 334 aa17.97■□□□□ 0.47
ALMS1-202ENST00000464408 NEUROD6Q96NK8 337 aa17.97■□□□□ 0.47
ALMS1-202ENST00000464408 DDX4Q9NQI0 724 aaKnown RBP17.97■□□□□ 0.47
ALMS1-202ENST00000464408 ZBTB22O15209 634 aa17.96■□□□□ 0.47
ALMS1-202ENST00000464408 IPO8O15397 1037 aaKnown RBP17.96■□□□□ 0.47
ALMS1-202ENST00000464408 ECM2O94769 699 aaPredicted RBP17.96■□□□□ 0.47
ALMS1-202ENST00000464408 GNAI2P04899 355 aa17.96■□□□□ 0.47
ALMS1-202ENST00000464408 PPATQ06203 517 aa17.96■□□□□ 0.47
ALMS1-202ENST00000464408 DZIP1Q86YF9 867 aaKnown RBP17.96■□□□□ 0.47
ALMS1-202ENST00000464408 MIER1Q8N108 512 aa17.96■□□□□ 0.47
ALMS1-202ENST00000464408 PDS5AQ29RF7 1337 aaKnown RBP17.96■□□□□ 0.46
ALMS1-202ENST00000464408 WDHD1O75717 1129 aaPredicted RBP17.95■□□□□ 0.46
ALMS1-202ENST00000464408 MOGSQ13724 837 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 MVPQ14764 893 aaKnown RBP17.95■□□□□ 0.46
ALMS1-202ENST00000464408 TBC1D9Q6ZT07 1266 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 IDI2Q9BXS1 227 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 HMG20BQ9P0W2 317 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 AKAP2Q9Y2D5 859 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 PTCH2Q9Y6C5 1203 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 PHIPQ8WWQ0 1821 aa17.95■□□□□ 0.46
ALMS1-202ENST00000464408 MYO5AQ9Y4I1 1855 aaKnown RBP17.95■□□□□ 0.46
ALMS1-202ENST00000464408 PTPRFP10586 1907 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 DDTLA6NHG4 134 aaPredicted RBP17.94■□□□□ 0.46
ALMS1-202ENST00000464408 PHF20L1A8MW92 1017 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 TLR2O60603 784 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 BTDP43251 543 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 MECOMQ03112 1051 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 PICALMQ13492 652 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 NOL9Q5SY16 702 aaKnown RBP17.94■□□□□ 0.46
ALMS1-202ENST00000464408 ZGPATQ8N5A5 531 aaKnown RBP17.94■□□□□ 0.46
ALMS1-202ENST00000464408 C1orf115Q9H7X2 142 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 KCNH4Q9UQ05 1017 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 DOCK1Q14185 1865 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms