RNA–Protein interactions for RNA: ENST00000463925.1

COL5A1-204, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-204ENST00000463925 GTF2A2P52657 109 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 SOX10P56693 466 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 CDC42EP5Q6NZY7 148 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 ZGPATQ8N5A5 531 aaKnown RBP21.7■■□□□ 1.06
COL5A1-204ENST00000463925 FAM151AQ8WW52 585 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 FRAT1Q92837 279 aaPredicted RBP21.7■■□□□ 1.06
COL5A1-204ENST00000463925 WRNIP1Q96S55 665 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 TNNQ9UQP3 1299 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 AKAP2Q9Y2D5 859 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 SNCAIPQ9Y6H5 919 aa21.7■■□□□ 1.06
COL5A1-204ENST00000463925 GNAI2P04899 355 aa21.69■■□□□ 1.06
COL5A1-204ENST00000463925 BRI3BPQ8WY22 251 aa21.69■■□□□ 1.06
COL5A1-204ENST00000463925 OTUD5Q96G74 571 aa21.69■■□□□ 1.06
COL5A1-204ENST00000463925 A0A1B0GUL7 405 aa21.68■■□□□ 1.06
COL5A1-204ENST00000463925 RASGRF1Q13972 1273 aa21.68■■□□□ 1.06
COL5A1-204ENST00000463925 ERO1BQ86YB8 467 aa21.68■■□□□ 1.06
COL5A1-204ENST00000463925 ZNF341Q9BYN7 854 aa21.68■■□□□ 1.06
COL5A1-204ENST00000463925 GAKO14976 1311 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 CCL15-CCL14A0A0B4J2E2 113 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 TIMM10P62072 90 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 TFCP2Q12800 502 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 NFIAQ12857 509 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 MVPQ14764 893 aaKnown RBP21.67■■□□□ 1.06
COL5A1-204ENST00000463925 CCL15Q16663 113 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 MIER1Q8N108 512 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 CLUAP1Q96AJ1 413 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 ERO1AQ96HE7 468 aa21.67■■□□□ 1.06
COL5A1-204ENST00000463925 ZKSCAN2Q63HK3 967 aa21.66■■□□□ 1.06
COL5A1-204ENST00000463925 OTOP1Q7RTM1 612 aa21.66■■□□□ 1.06
COL5A1-204ENST00000463925 XAGE2Q96GT9 111 aa21.66■■□□□ 1.06
COL5A1-204ENST00000463925 TRIM17Q9Y577 477 aa21.66■■□□□ 1.06
COL5A1-204ENST00000463925 MYH2Q9UKX2 1941 aa21.65■■□□□ 1.06
COL5A1-204ENST00000463925 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
COL5A1-204ENST00000463925 PPIL2Q13356 520 aa21.65■■□□□ 1.06
COL5A1-204ENST00000463925 ZKSCAN4Q969J2 545 aaPredicted RBP21.65■■□□□ 1.06
COL5A1-204ENST00000463925 USP40Q9NVE5 1235 aa21.65■■□□□ 1.06
COL5A1-204ENST00000463925 FAM198AQ9UFP1 575 aa21.65■■□□□ 1.06
COL5A1-204ENST00000463925 PDE4DIPQ5VU43 2346 aa21.64■■□□□ 1.06
COL5A1-204ENST00000463925 RFX7Q2KHR2 1363 aa21.64■■□□□ 1.06
COL5A1-204ENST00000463925 PNMA6EA0A0J9YXQ4 647 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 CETPP11597 493 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 TCP10Q12799 353 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 TAF1CQ15572 869 aaPredicted RBP21.64■■□□□ 1.05
COL5A1-204ENST00000463925 MIGA2Q7L4E1 593 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 DZIP1Q86YF9 867 aaKnown RBP21.64■■□□□ 1.05
COL5A1-204ENST00000463925 SLF2Q8IX21 1173 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 FAM43AQ8N2R8 423 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 TMEM57Q8N5G2 664 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 ZCCHC17Q9NP64 241 aaKnown RBP21.64■■□□□ 1.05
COL5A1-204ENST00000463925 ZNF112Q9UJU3 913 aa21.64■■□□□ 1.05
COL5A1-204ENST00000463925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.64■■□□□ 1.05
COL5A1-204ENST00000463925 IRF6O14896 467 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 INPP5BP32019 993 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 SP3Q02447 781 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 SNAPC2Q13487 334 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 SPTY2D1Q68D10 685 aaPredicted RBP21.63■■□□□ 1.05
COL5A1-204ENST00000463925 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 FAM163AQ96GL9 167 aaPredicted RBP21.63■■□□□ 1.05
COL5A1-204ENST00000463925 IDI2Q9BXS1 227 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 ZFYVE28Q9HCC9 887 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 ABCF2Q9UG63 623 aa21.63■■□□□ 1.05
COL5A1-204ENST00000463925 PPATQ06203 517 aa21.62■■□□□ 1.05
COL5A1-204ENST00000463925 NOL9Q5SY16 702 aaKnown RBP21.62■■□□□ 1.05
COL5A1-204ENST00000463925 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
COL5A1-204ENST00000463925 AK9Q5TCS8 1911 aa21.61■■□□□ 1.05
COL5A1-204ENST00000463925 ENTPD3O75355 529 aa21.61■■□□□ 1.05
COL5A1-204ENST00000463925 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL5A1-204ENST00000463925 NEUROD6Q96NK8 337 aa21.61■■□□□ 1.05
COL5A1-204ENST00000463925 DOCK2Q92608 1830 aa21.61■■□□□ 1.05
COL5A1-204ENST00000463925 MROH7-TTC4A0A0A0MT08 1334 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 ARID4AP29374 1257 aaPredicted RBP21.6■■□□□ 1.05
COL5A1-204ENST00000463925 RGS3P49796 1198 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 POLA2Q14181 598 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 EFCC1Q9HA90 598 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 HMG20BQ9P0W2 317 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 PTPN22Q9Y2R2 807 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 HTTP42858 3142 aa21.6■■□□□ 1.05
COL5A1-204ENST00000463925 BTBD19C9JJ37 291 aa21.59■■□□□ 1.05
COL5A1-204ENST00000463925 WDHD1O75717 1129 aaPredicted RBP21.59■■□□□ 1.05
COL5A1-204ENST00000463925 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
COL5A1-204ENST00000463925 ZFPM1Q8IX07 1006 aa21.59■■□□□ 1.05
COL5A1-204ENST00000463925 KCNH4Q9UQ05 1017 aa21.59■■□□□ 1.05
COL5A1-204ENST00000463925 BTDP43251 543 aa21.58■■□□□ 1.05
COL5A1-204ENST00000463925 CAP1Q01518 475 aa21.58■■□□□ 1.05
COL5A1-204ENST00000463925 MECOMQ03112 1051 aa21.58■■□□□ 1.05
COL5A1-204ENST00000463925 GORABQ5T7V8 394 aa21.58■■□□□ 1.05
COL5A1-204ENST00000463925 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
COL5A1-204ENST00000463925 SPATA5Q8NB90 893 aa21.58■■□□□ 1.05
COL5A1-204ENST00000463925 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 GPR75-ASB3A0A0A6YYF3 556 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 TLR2O60603 784 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 ARHGEF6Q15052 776 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.57■■□□□ 1.04
COL5A1-204ENST00000463925 SSH3Q8TE77 659 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 ZNF384Q8TF68 577 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 GPR108Q9NPR9 543 aa21.57■■□□□ 1.04
COL5A1-204ENST00000463925 UQCRFS1P1P0C7P4 283 aa21.56■■□□□ 1.04
COL5A1-204ENST00000463925 ATP8B2P98198 1209 aa21.56■■□□□ 1.04
COL5A1-204ENST00000463925 MAP3K10Q02779 954 aa21.56■■□□□ 1.04
COL5A1-204ENST00000463925 PI16Q6UXB8 463 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms