RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 RASSF7Q02833 373 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 ZNF252P-AS1Q0IIN9 211 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 PDE3AQ14432 1141 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 FOXD4L6Q3SYB3 417 aaPredicted RBP6.9□□□□□ -1.3
HERC4-208ENST00000463478 FOXD4L3Q6VB84 417 aaPredicted RBP6.9□□□□□ -1.3
HERC4-208ENST00000463478 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 ILDR2Q71H61 639 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 GAL3ST3Q96A11 431 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 SCARF2Q96GP6 870 aaPredicted RBP6.9□□□□□ -1.3
HERC4-208ENST00000463478 ACSBG1Q96GR2 724 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 PLVAPQ9BX97 442 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 NRSN2Q9GZP1 204 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 KCNQ5Q9NR82 932 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 UBP1Q9NZI7 540 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 MKL2Q9ULH7 1088 aa6.9□□□□□ -1.3
HERC4-208ENST00000463478 GNB5O14775 395 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 GREM1O60565 184 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 ADAM11O75078 769 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 TRIM37O94972 964 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 F13A1P00488 732 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 CTSBP07858 339 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 ARID5AQ03989 594 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 APOBRQ0VD83 1088 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 DIEXFQ68CQ4 756 aaKnown RBP6.89□□□□□ -1.31
HERC4-208ENST00000463478 LINC00114Q6XXX2 140 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 FMR1NBQ8N0W7 255 aaPredicted RBP6.89□□□□□ -1.31
HERC4-208ENST00000463478 DRC1Q96MC2 740 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 NT5C1AQ9BXI3 368 aa6.89□□□□□ -1.31
HERC4-208ENST00000463478 CCDC86Q9H6F5 360 aaKnown RBP6.89□□□□□ -1.31
HERC4-208ENST00000463478 SPDYE3A6NKU9 549 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 PIK3R2O00459 728 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 TM4SF5O14894 197 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 BPNT1O95861 308 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 PTPN11Q06124 597 aaPredicted RBP6.88□□□□□ -1.31
HERC4-208ENST00000463478 FAM196AQ6ZSG2 479 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
HERC4-208ENST00000463478 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 TMEM151AQ8N4L1 468 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 FBXO27Q8NI29 283 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 RASGRP4Q8TDF6 673 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 GPBAR1Q8TDU6 330 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 UBASH3BQ8TF42 649 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 GATAD2BQ8WXI9 593 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 NKD1Q969G9 470 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 PRKAG2Q9UGJ0 569 aa6.88□□□□□ -1.31
HERC4-208ENST00000463478 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 GDF11O95390 407 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
HERC4-208ENST00000463478 LIG1P18858 919 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 CRKP46108 304 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 HNRNPUQ00839 825 aaKnown RBP eCLIP6.87□□□□□ -1.31
HERC4-208ENST00000463478 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
HERC4-208ENST00000463478 PODNQ7Z5L7 613 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
HERC4-208ENST00000463478 KRT82Q9NSB4 513 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 PCDHA4Q9UN74 947 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 EFR3BQ9Y2G0 817 aa6.87□□□□□ -1.31
HERC4-208ENST00000463478 FAM221AA4D161 298 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 DLL1O00548 723 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 MPP2Q14168 576 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 SEZ6Q53EL9 994 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 HP1BP3Q5SSJ5 553 aaPredicted RBP6.86□□□□□ -1.31
HERC4-208ENST00000463478 SCARA3Q6AZY7 606 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
HERC4-208ENST00000463478 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
HERC4-208ENST00000463478 ROBO2Q9HCK4 1378 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 CNTNAP5Q8WYK1 1306 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 ZNF862O60290 1169 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 CILPO75339 1184 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 WISP1O95388 367 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 DLGAP3O95886 979 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 ATP2B1P20020 1258 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 NASPP49321 788 aaPredicted RBP6.85□□□□□ -1.31
HERC4-208ENST00000463478 RPL6Q02878 288 aaKnown RBP6.85□□□□□ -1.31
HERC4-208ENST00000463478 CWF19L2Q2TBE0 894 aaKnown RBP6.85□□□□□ -1.31
HERC4-208ENST00000463478 PRRT3Q5FWE3 981 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 ACAD11Q709F0 780 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 WDR89Q96FK6 387 aaPredicted RBP6.85□□□□□ -1.31
HERC4-208ENST00000463478 GMLQ99445 158 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 LRRC3Q9BY71 257 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 RAD18Q9NS91 495 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 GINM1Q9NU53 330 aa6.85□□□□□ -1.31
HERC4-208ENST00000463478 NOP53Q9NZM5 478 aaKnown RBP6.85□□□□□ -1.31
HERC4-208ENST00000463478 FGRP09769 529 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 MCM4P33991 863 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 GTF2F1P35269 517 aaKnown RBP eCLIP6.84□□□□□ -1.31
HERC4-208ENST00000463478 CDK8P49336 464 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 WIPI1Q5MNZ9 446 aaPredicted RBP6.84□□□□□ -1.31
HERC4-208ENST00000463478 REC114Q7Z4M0 266 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 ELMO3Q96BJ8 720 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 SEC16BQ96JE7 1060 aa6.84□□□□□ -1.31
HERC4-208ENST00000463478 WDR18Q9BV38 432 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms