RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 ZFPM1Q8IX07 1006 aa10.6□□□□□ -0.71
TMEM254-208ENST00000463209 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.6□□□□□ -0.71
TMEM254-208ENST00000463209 DOCK2Q92608 1830 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 ZAP70P43403 619 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 FKBP1BP68106 108 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 HDLBPQ00341 1268 aaKnown RBP10.59□□□□□ -0.71
TMEM254-208ENST00000463209 NOGQ13253 232 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 HHIPL2Q6UWX4 724 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 RHPN1Q8TCX5 695 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 CRBNQ96SW2 442 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 PIH1D3Q9NQM4 214 aaKnown RBP10.59□□□□□ -0.71
TMEM254-208ENST00000463209 USP40Q9NVE5 1235 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 RAI14Q9P0K7 980 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 SUGT1Q9Y2Z0 365 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 PPP2R3BQ9Y5P8 575 aa10.59□□□□□ -0.71
TMEM254-208ENST00000463209 SMARCA5O60264 1052 aaPredicted RBP10.58□□□□□ -0.72
TMEM254-208ENST00000463209 USP2O75604 605 aaPredicted RBP10.58□□□□□ -0.72
TMEM254-208ENST00000463209 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 MAP2K2P36507 400 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 BTDP43251 543 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 MAP2K1Q02750 393 aaPredicted RBP10.58□□□□□ -0.72
TMEM254-208ENST00000463209 PICALMQ13492 652 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 TNFAIP1Q13829 316 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 CCDC158Q5M9N0 1113 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 ERICH6Q7L0X2 663 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 ARMC9Q7Z3E5 817 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 RPAP2Q8IXW5 612 aaPredicted RBP10.58□□□□□ -0.72
TMEM254-208ENST00000463209 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 GPR108Q9NPR9 543 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 TMOD2Q9NZR1 351 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 MROH7-TTC4A0A0A0MT08 1334 aa10.58□□□□□ -0.72
TMEM254-208ENST00000463209 PDS5AQ29RF7 1337 aaKnown RBP10.58□□□□□ -0.72
TMEM254-208ENST00000463209 AK9Q5TCS8 1911 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 CYP2E1P05181 493 aaPredicted RBP10.57□□□□□ -0.72
TMEM254-208ENST00000463209 TNNI2P48788 182 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 CTCFP49711 727 aaPredicted RBP10.57□□□□□ -0.72
TMEM254-208ENST00000463209 SUPT20HL1Q3ZLR7 823 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 LDLRAD1Q5T700 205 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 MIGA2Q7L4E1 593 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 ADGRA1Q86SQ6 560 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 NSUN4Q96CB9 384 aaKnown RBP10.57□□□□□ -0.72
TMEM254-208ENST00000463209 BEGAINQ9BUH8 593 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 ANTXR1Q9H6X2 564 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 ELP3Q9H9T3 547 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 DDX4Q9NQI0 724 aaKnown RBP10.57□□□□□ -0.72
TMEM254-208ENST00000463209 LRP2BPQ9P2M1 347 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 CDK5RAP2Q96SN8 1893 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 GAKO14976 1311 aa10.57□□□□□ -0.72
TMEM254-208ENST00000463209 RFX7Q2KHR2 1363 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
TMEM254-208ENST00000463209 HMMRO75330 724 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 GJA5P36382 358 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 RGS3P49796 1198 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 ERC1Q8IUD2 1116 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 ZGPATQ8N5A5 531 aaKnown RBP10.56□□□□□ -0.72
TMEM254-208ENST00000463209 CSRNP1Q96S65 589 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 MRIQ9BWK5 157 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 PCDHB15Q9Y5E8 787 aa10.56□□□□□ -0.72
TMEM254-208ENST00000463209 WDHD1O75717 1129 aaPredicted RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 TRPA1O75762 1119 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 IREB2P48200 963 aaKnown RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 VGLL4Q14135 290 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 MAP3K11Q16584 847 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 SPRYD7Q5W111 196 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 TSHZ3Q63HK5 1081 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 SPTY2D1Q68D10 685 aaPredicted RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 SH3BP5LQ7L8J4 393 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 SH3RF3Q8TEJ3 882 aaPredicted RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 ZKSCAN4Q969J2 545 aaPredicted RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 SLC10A4Q96EP9 437 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 EDC3Q96F86 508 aaKnown RBP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 WNK4Q96J92 1243 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 RNF186Q9NXI6 227 aa10.55□□□□□ -0.72
TMEM254-208ENST00000463209 AATFQ9NY61 560 aaKnown RBP eCLIP10.55□□□□□ -0.72
TMEM254-208ENST00000463209 LAMB1P07942 1786 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 GPR75-ASB3A0A0A6YYF3 556 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 FAM196BA6NMK8 535 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 CAPN15O75808 1086 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 RHBDL3P58872 404 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 DYNLL1P63167 89 aaKnown RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 SLC4A8Q2Y0W8 1093 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 HSP90AB4PQ58FF6 505 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 FAM83AQ86UY5 434 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 ZSCAN29Q8IWY8 852 aaPredicted RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 FAM151AQ8WW52 585 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 OPTNQ96CV9 577 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 KIF1BPQ96EK5 621 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 OTUD5Q96G74 571 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 WRNIP1Q96S55 665 aa10.54□□□□□ -0.72
TMEM254-208ENST00000463209 DNAJC2Q99543 621 aaKnown RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 CHMP4BQ9H444 224 aaKnown RBP10.54□□□□□ -0.72
TMEM254-208ENST00000463209 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms