RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 AKNAD1Q5T1N1 836 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 PROM2Q8N271 834 aa11.94□□□□□ -0.5
MSH5-211ENST00000463144 ZSCAN16Q9H4T2 348 aaPredicted RBP11.94□□□□□ -0.5
MSH5-211ENST00000463144 NPHP1O15259 732 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 DYNLL1P63167 89 aaKnown RBP11.93□□□□□ -0.5
MSH5-211ENST00000463144 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 CCDC183Q5T5S1 534 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 SDR42E1Q8WUS8 393 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 LY9Q9HBG7 655 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 MAGEB6P1A0A0J9YX57 407 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 SMIM22K7EJ46 135 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 SEMA3EO15041 775 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 KDM4AO75164 1064 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 TDO2P48775 406 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 GUCY1B3Q02153 619 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 GRAPQ13588 217 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 GRAPLQ8TC17 118 aaPredicted RBP11.93□□□□□ -0.5
MSH5-211ENST00000463144 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 TMEM87BQ96K49 555 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 NACAP1Q9BZK3 213 aa11.93□□□□□ -0.5
MSH5-211ENST00000463144 SCAND2PQ9GZW5 306 aaPredicted RBP11.93□□□□□ -0.5
MSH5-211ENST00000463144 PDS5AQ29RF7 1337 aaKnown RBP11.92□□□□□ -0.5
MSH5-211ENST00000463144 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
MSH5-211ENST00000463144 STAG1Q8WVM7 1258 aa11.92□□□□□ -0.5
MSH5-211ENST00000463144 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
MSH5-211ENST00000463144 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
MSH5-211ENST00000463144 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
MSH5-211ENST00000463144 LIG1P18858 919 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 RXRAP19793 462 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 MFSD6Q6ZSS7 791 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 SGMS1Q86VZ5 419 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 PGBD1Q96JS3 809 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 BAZ2AQ9UIF9 1905 aaKnown RBP11.91□□□□□ -0.5
MSH5-211ENST00000463144 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
MSH5-211ENST00000463144 SERPINB2P05120 415 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 CDC27P30260 824 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
MSH5-211ENST00000463144 MECOMQ03112 1051 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 PPARAQ07869 468 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 TMEM67Q5HYA8 995 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 TSPY26PQ9H489 355 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
MSH5-211ENST00000463144 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
MSH5-211ENST00000463144 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
MSH5-211ENST00000463144 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
MSH5-211ENST00000463144 PRDX5P30044 214 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 CHAF1AQ13111 956 aaPredicted RBP11.9□□□□□ -0.5
MSH5-211ENST00000463144 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 KRT23Q9C075 422 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-211ENST00000463144 CNNM2Q9H8M5 875 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 ZBTB22O15209 634 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 LIFRP42702 1097 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 METAP2P50579 478 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSH5-211ENST00000463144 DDR1Q08345 913 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 NTRK3Q16288 839 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 TXNRD1Q16881 649 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 CRY2Q49AN0 593 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.5
MSH5-211ENST00000463144 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 ZKSCAN3Q9BRR0 538 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 JAG2Q9Y219 1238 aa11.9□□□□□ -0.5
MSH5-211ENST00000463144 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.51
MSH5-211ENST00000463144 CYP2D7A0A087X1C5 515 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 CPLX1O14810 134 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
MSH5-211ENST00000463144 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
MSH5-211ENST00000463144 GIMAP6Q6P9H5 292 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 RNF214Q8ND24 703 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 FBXO18Q8NFZ0 1043 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 FUCA2Q9BTY2 467 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 RCOR1Q9UKL0 485 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 CFAP45Q9UL16 551 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 LEMD3Q9Y2U8 911 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 ZBTB43O43298 467 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 RXRBP28702 533 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 CEBPZQ03701 1054 aaKnown RBP11.89□□□□□ -0.51
MSH5-211ENST00000463144 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 CCDC144CPQ8IYA2 1237 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 AIFM3Q96NN9 605 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
MSH5-211ENST00000463144 BRIP1Q9BX63 1249 aa11.89□□□□□ -0.51
MSH5-211ENST00000463144 MAST2Q6P0Q8 1798 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 POLRMTO00411 1230 aaKnown RBP11.88□□□□□ -0.51
MSH5-211ENST00000463144 GPSM2P81274 684 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 EVX2Q03828 476 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 CCDC173Q0VFZ6 552 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
MSH5-211ENST00000463144 TDRD7Q8NHU6 1098 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms