RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 RBBP8NLQ8NC74 664 aaPredicted RBP5.4□□□□□ -1.54
GPNMB-205ENST00000463011 GAL3ST3Q96A11 431 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 ZNF837Q96EG3 531 aaPredicted RBP5.4□□□□□ -1.54
GPNMB-205ENST00000463011 EMILIN2Q9BXX0 1053 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 LACRTQ9GZZ8 138 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 SH2B1Q9NRF2 756 aaPredicted RBP5.4□□□□□ -1.54
GPNMB-205ENST00000463011 PFDN2Q9UHV9 154 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 LEMD3Q9Y2U8 911 aa5.4□□□□□ -1.54
GPNMB-205ENST00000463011 POLR3KQ9Y2Y1 108 aaPredicted RBP5.4□□□□□ -1.54
GPNMB-205ENST00000463011 PTPRAP18433 802 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 CASP7P55210 303 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 RPL6Q02878 288 aaKnown RBP5.39□□□□□ -1.55
GPNMB-205ENST00000463011 SQSTM1Q13501 440 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 PCSK7Q16549 785 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 MTERF2Q49AM1 385 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 MAP1SQ66K74 1059 aaPredicted RBP5.39□□□□□ -1.55
GPNMB-205ENST00000463011 NOL8Q76FK4 1167 aaKnown RBP5.39□□□□□ -1.55
GPNMB-205ENST00000463011 FAM35AQ86V20 835 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 ANTXR1Q9H6X2 564 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 TMEM260Q9NX78 707 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 PHF24Q9UPV7 400 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 PRKAB1Q9Y478 270 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 KDM2BQ8NHM5 1336 aa5.39□□□□□ -1.55
GPNMB-205ENST00000463011 B2RBV5 119 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 DIAPH1O60610 1272 aaKnown RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 ESRRAP11474 423 aaPredicted RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 CDK8P49336 464 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 PCBP4P57723 403 aaKnown RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 ZNF252P-AS1Q0IIN9 211 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 PKDCCQ504Y2 493 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 ARSHQ5FYA8 562 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 PERM1Q5SV97 790 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 C16orf86Q6ZW13 317 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 SPATC1Q76KD6 591 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 KIAA0907Q7Z7F0 614 aaPredicted RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 ZC3H12CQ9C0D7 883 aaKnown RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 ADAM19Q9H013 955 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 SMG9Q9H0W8 520 aaKnown RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 METTL14Q9HCE5 456 aaKnown RBP5.38□□□□□ -1.55
GPNMB-205ENST00000463011 ATP13A2Q9NQ11 1180 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 KLHL42Q9P2K6 505 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 TRIM33Q9UPN9 1127 aa5.38□□□□□ -1.55
GPNMB-205ENST00000463011 A0A1W2PQH9 124 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 GPR25O00155 361 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 DGAT1O75907 488 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 ATE1O95260 518 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 ITGA6P23229 1130 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 AMPD3Q01432 767 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 IKBKEQ14164 716 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 TKFCQ3LXA3 575 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 C2orf27AQ580R0 203 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 ELMSAN1Q6PJG2 1045 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 C6orf15Q6UXA7 325 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-205ENST00000463011 TTC6Q86TZ1 520 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 PDZD3Q86UT5 571 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 FAM178BQ8IXR5 827 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 THAP3Q8WTV1 239 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-205ENST00000463011 GMCL1Q96IK5 515 aa5.37□□□□□ -1.55
GPNMB-205ENST00000463011 FAM177BA6PVY3 158 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 SOX1O00570 391 aaPredicted RBP5.36□□□□□ -1.55
GPNMB-205ENST00000463011 C2CD2LO14523 706 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 SIN3BO75182 1162 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 GSTP1P09211 210 aaKnown RBP5.36□□□□□ -1.55
GPNMB-205ENST00000463011 CDC25BP30305 580 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 MASP1P48740 699 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 SSRP1Q08945 709 aaKnown RBP5.36□□□□□ -1.55
GPNMB-205ENST00000463011 HGSNATQ68CP4 663 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 GDF6Q6KF10 455 aaPredicted RBP5.36□□□□□ -1.55
GPNMB-205ENST00000463011 RPUSD2Q8IZ73 545 aaKnown RBP5.36□□□□□ -1.55
GPNMB-205ENST00000463011 ZSCAN1Q8NBB4 408 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 DDX54Q8TDD1 881 aaKnown RBP5.36□□□□□ -1.55
GPNMB-205ENST00000463011 TRERF1Q96PN7 1200 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 POLR3GLQ9BT43 218 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 DACH1Q9UI36 760 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 ZMYM5Q9UJ78 669 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 NAGPAQ9UK23 515 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 PCDHA4Q9UN74 947 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 SLC6A14Q9UN76 642 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 CORINQ9Y5Q5 1042 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 PTCH2Q9Y6C5 1203 aa5.36□□□□□ -1.55
GPNMB-205ENST00000463011 ST8SIA5O15466 376 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 ASMTLO95671 621 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 BMP4P12644 408 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 EPHA1P21709 976 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 CDC27P30260 824 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 CABP4P57796 275 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 GSTM4Q03013 218 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 C21orf62-AS1Q17RA5 79 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 LRRFIP1Q32MZ4 808 aaKnown RBP5.35□□□□□ -1.55
GPNMB-205ENST00000463011 TAF7LQ5H9L4 462 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 ZNF468Q5VIY5 522 aaPredicted RBP5.35□□□□□ -1.55
GPNMB-205ENST00000463011 FOXR1Q6PIV2 292 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 C19orf47Q8N9M1 422 aaKnown RBP5.35□□□□□ -1.55
GPNMB-205ENST00000463011 ACSBG1Q96GR2 724 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 FEZ1Q99689 392 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 LPIN3Q9BQK8 851 aa5.35□□□□□ -1.55
GPNMB-205ENST00000463011 CDC14CA4D256 554 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms