RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 SLC9A9Q8IVB4 645 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 PRDM10Q9NQV6 1147 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
SPTA1-202ENST00000461624 FAM208AQ9UK61 1670 aaKnown RBP7.78□□□□□ -1.16
SPTA1-202ENST00000461624 DEPDC4Q8N2C3 294 aa7.77□□□□□ -1.17
SPTA1-202ENST00000461624 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
SPTA1-202ENST00000461624 K7ELQ4 463 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-202ENST00000461624 FOXN1O15353 648 aa7.76□□□□□ -1.17
SPTA1-202ENST00000461624 C16orf71Q8IYS4 520 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-202ENST00000461624 KCNH5Q8NCM2 988 aa7.76□□□□□ -1.17
SPTA1-202ENST00000461624 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
SPTA1-202ENST00000461624 MAP2P11137 1827 aaKnown RBP7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-202ENST00000461624 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ELOA3DA6NLF2 546 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-202ENST00000461624 M0R2N6 131 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 HIRAP54198 1017 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ELOA3BQ3SY89 546 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 C9orf131Q5VYM1 1079 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 FLAD1Q8NFF5 587 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ELOA3Q8NG57 546 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 TPCN2Q8NHX9 752 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ADAMTS19Q8TE59 1207 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ZNF232Q9UNY5 417 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 KDM6AO15550 1401 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-202ENST00000461624 VIRMAQ69YN4 1812 aaKnown RBP7.75□□□□□ -1.17
SPTA1-202ENST00000461624 TTC21BQ7Z4L5 1316 aa7.75□□□□□ -1.17
SPTA1-202ENST00000461624 ATP9BO43861 1147 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 PCBP4P57723 403 aaKnown RBP7.74□□□□□ -1.17
SPTA1-202ENST00000461624 PSMA6P60900 246 aaKnown RBP7.74□□□□□ -1.17
SPTA1-202ENST00000461624 C1orf53Q5VUE5 145 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 SMIM5Q71RC9 77 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 ABHD8Q96I13 439 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 UCN2Q96RP3 112 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 MDFIQ99750 246 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 NEUROD4Q9HD90 331 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 NLRP2Q9NX02 1062 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 CHMP3Q9Y3E7 222 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 MON2Q7Z3U7 1717 aa7.74□□□□□ -1.17
SPTA1-202ENST00000461624 NSD3Q9BZ95 1437 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 C1QTNF9BB2RNN3 333 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 SIN3BO75182 1162 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 MLLT1Q03111 559 aaPredicted RBP7.73□□□□□ -1.17
SPTA1-202ENST00000461624 CCDC102BQ68D86 513 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 LRRC69Q6ZNQ3 347 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 RHPN1Q8TCX5 695 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 C7orf43Q8WVR3 580 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
SPTA1-202ENST00000461624 KIAA1024Q9UPX6 916 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 MEGF6O75095 1541 aa7.73□□□□□ -1.17
SPTA1-202ENST00000461624 USP31Q70CQ4 1352 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 USP47Q96K76 1375 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 PALM3A6NDB9 673 aaPredicted RBP7.72□□□□□ -1.17
SPTA1-202ENST00000461624 ZBTB7BO15156 539 aaPredicted RBP7.72□□□□□ -1.17
SPTA1-202ENST00000461624 KCNA3P22001 575 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 ALAS2P22557 587 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 CLDN10P78369 228 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 ARHGAP27Q6ZUM4 889 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 CD163Q86VB7 1156 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 SIX5Q8N196 739 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 DDX54Q8TDD1 881 aaKnown RBP7.72□□□□□ -1.17
SPTA1-202ENST00000461624 ANKRD24Q8TF21 1146 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 SYTL4Q96C24 671 aaPredicted RBP7.72□□□□□ -1.17
SPTA1-202ENST00000461624 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 TTC21AQ8NDW8 1320 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 C4AP0C0L4 1744 aa7.72□□□□□ -1.17
SPTA1-202ENST00000461624 RGPD2P0DJD1 1756 aa7.71□□□□□ -1.17
SPTA1-202ENST00000461624 A0A0G2JLW4 131 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 ADARB2-AS1A8MUL3 147 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 SPATA31C1P0DKV0 1188 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 TGFB2P61812 414 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
SPTA1-202ENST00000461624 TBCELQ5QJ74 424 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 TRIM11Q96F44 468 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 TSPAN10Q9H1Z9 355 aaPredicted RBP7.71□□□□□ -1.18
SPTA1-202ENST00000461624 ANKIB1Q9P2G1 1089 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 SERPINA10Q9UK55 444 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 ITGB4P16144 1822 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 CNTNAP1P78357 1384 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 PALLDQ8WX93 1383 aa7.71□□□□□ -1.18
SPTA1-202ENST00000461624 TIAM2Q8IVF5 1701 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 SPDYE3A6NKU9 549 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 DPEP1P16444 411 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 CHRNA4P43681 627 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 CTCFP49711 727 aaPredicted RBP7.7□□□□□ -1.18
SPTA1-202ENST00000461624 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 SH3PXD2AQ5TCZ1 1133 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 TNFRSF25Q93038 417 aa7.7□□□□□ -1.18
SPTA1-202ENST00000461624 MKRN1Q9UHC7 482 aaKnown RBP7.7□□□□□ -1.18
SPTA1-202ENST00000461624 MMP10P09238 476 aa7.69□□□□□ -1.18
SPTA1-202ENST00000461624 FURINP09958 794 aa7.69□□□□□ -1.18
SPTA1-202ENST00000461624 SSFA2P28290 1259 aa7.69□□□□□ -1.18
SPTA1-202ENST00000461624 DCAF11Q8TEB1 546 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms