RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
DNMT3A-207ENST00000461228 IRF6O14896 467 aa18.27■□□□□ 0.52
DNMT3A-207ENST00000461228 ANP32CO43423 234 aa18.27■□□□□ 0.52
DNMT3A-207ENST00000461228 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.52
DNMT3A-207ENST00000461228 WDR66Q8TBY9 1149 aa18.27■□□□□ 0.52
DNMT3A-207ENST00000461228 ZNF341Q9BYN7 854 aa18.27■□□□□ 0.52
DNMT3A-207ENST00000461228 AK9Q5TCS8 1911 aa18.27■□□□□ 0.51
DNMT3A-207ENST00000461228 GRIK5Q16478 980 aa18.26■□□□□ 0.51
DNMT3A-207ENST00000461228 ANKRD23Q86SG2 305 aa18.26■□□□□ 0.51
DNMT3A-207ENST00000461228 ZNF112Q9UJU3 913 aa18.26■□□□□ 0.51
DNMT3A-207ENST00000461228 LOC285556D6RIA3 1793 aa18.26■□□□□ 0.51
DNMT3A-207ENST00000461228 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
DNMT3A-207ENST00000461228 LAMA3Q16787 3333 aa18.26■□□□□ 0.51
DNMT3A-207ENST00000461228 PDS5AQ29RF7 1337 aaKnown RBP18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 BTBD19C9JJ37 291 aa18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 SEMA3EO15041 775 aa18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 FRAT2O75474 233 aaPredicted RBP18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 CAPN2P17655 700 aa18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 EN2P19622 333 aaPredicted RBP18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 LRRC24Q50LG9 513 aa18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 FAM151AQ8WW52 585 aa18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 LPIN2Q92539 896 aa18.25■□□□□ 0.51
DNMT3A-207ENST00000461228 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
DNMT3A-207ENST00000461228 C17orf99Q6UX52 265 aa18.24■□□□□ 0.51
DNMT3A-207ENST00000461228 MAST2Q6P0Q8 1798 aa18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 CIAO1O76071 339 aa18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 SLC5A1P13866 664 aa18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 FXR1P51114 621 aaKnown RBP eCLIP18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 NKX2-3Q8TAU0 364 aa18.23■□□□□ 0.51
DNMT3A-207ENST00000461228 EYA2O00167 538 aa18.22■□□□□ 0.51
DNMT3A-207ENST00000461228 RFX5P48382 616 aaPredicted RBP18.22■□□□□ 0.51
DNMT3A-207ENST00000461228 BCAMP50895 628 aa18.22■□□□□ 0.51
DNMT3A-207ENST00000461228 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
DNMT3A-207ENST00000461228 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
DNMT3A-207ENST00000461228 E9PSI1 815 aa18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 CACNB3P54284 484 aa18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 PARK7Q99497 189 aaKnown RBP18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 SRRDQ9UH36 339 aa18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 SLC45A1Q9Y2W3 748 aa18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 ATAD5Q96QE3 1844 aa18.21■□□□□ 0.51
DNMT3A-207ENST00000461228 HOXD10P28358 340 aa18.2■□□□□ 0.5
DNMT3A-207ENST00000461228 MOGSQ13724 837 aa18.2■□□□□ 0.5
DNMT3A-207ENST00000461228 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
DNMT3A-207ENST00000461228 GAKO14976 1311 aa18.2■□□□□ 0.5
DNMT3A-207ENST00000461228 CXCL11O14625 94 aa18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 UBE2Q1Q7Z7E8 422 aa18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 ZGPATQ8N5A5 531 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 SHISA4Q96DD7 197 aa18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 IDI2Q9BXS1 227 aa18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 ARHGAP39Q9C0H5 1083 aa18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
DNMT3A-207ENST00000461228 PDHXO00330 501 aa18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 CT47B1P0C2W7 299 aaPredicted RBP18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 BCRP11274 1271 aa18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 ATG9AQ7Z3C6 839 aa18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 TRIM47Q96LD4 638 aa18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 GNL3LQ9NVN8 582 aaKnown RBP18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
DNMT3A-207ENST00000461228 FOCADQ5VW36 1801 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 ENTPD3O75355 529 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 INPP5BP32019 993 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 GJA8P48165 433 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 MAP3K10Q02779 954 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 CDC42EP5Q6NZY7 148 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 SLAIN1Q8ND83 568 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
DNMT3A-207ENST00000461228 A0A0G2JLL6 359 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 GJB1P08034 283 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 OSBPP22059 807 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 PRDX5P30044 214 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 GRK4P32298 578 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 PRRT2Q7Z6L0 340 aaPredicted RBP18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 KLHDC4Q8TBB5 520 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 FAM198AQ9UFP1 575 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 MYPNQ86TC9 1320 aa18.16■□□□□ 0.5
DNMT3A-207ENST00000461228 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 LDHBP07195 334 aaKnown RBP18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 PSMC4P43686 418 aa18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 NFIAQ12857 509 aa18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 ATP2B3Q16720 1220 aa18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 FASTKD5Q7L8L6 764 aaKnown RBP18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 SCYL3Q8IZE3 742 aa18.15■□□□□ 0.5
DNMT3A-207ENST00000461228 MAP4K4O95819 1239 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 CTGFP29279 349 aa18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 IL15P40933 162 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 FCGRTP55899 365 aa18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 DIXDC1Q155Q3 683 aa18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 SLF2Q8IX21 1173 aa18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
DNMT3A-207ENST00000461228 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms