RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 HOOK2Q96ED9 719 aa18.33■□□□□ 0.52
SMPD4-216ENST00000461187 API5Q9BZZ5 524 aaKnown RBP18.33■□□□□ 0.52
SMPD4-216ENST00000461187 EFCC1Q9HA90 598 aa18.33■□□□□ 0.52
SMPD4-216ENST00000461187 DAGLAQ9Y4D2 1042 aa18.33■□□□□ 0.52
SMPD4-216ENST00000461187 PHIPQ8WWQ0 1821 aa18.33■□□□□ 0.52
SMPD4-216ENST00000461187 PRDX5P30044 214 aa18.32■□□□□ 0.52
SMPD4-216ENST00000461187 DIXDC1Q155Q3 683 aa18.32■□□□□ 0.52
SMPD4-216ENST00000461187 ERO1BQ86YB8 467 aa18.32■□□□□ 0.52
SMPD4-216ENST00000461187 ZFYVE28Q9HCC9 887 aa18.32■□□□□ 0.52
SMPD4-216ENST00000461187 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
SMPD4-216ENST00000461187 IL15P40933 162 aaPredicted RBP18.31■□□□□ 0.52
SMPD4-216ENST00000461187 DCAF15Q66K64 600 aa18.31■□□□□ 0.52
SMPD4-216ENST00000461187 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
SMPD4-216ENST00000461187 CDC42EP5Q6NZY7 148 aa18.31■□□□□ 0.52
SMPD4-216ENST00000461187 FAM151AQ8WW52 585 aa18.31■□□□□ 0.52
SMPD4-216ENST00000461187 MEIS3Q99687 375 aa18.31■□□□□ 0.52
SMPD4-216ENST00000461187 COPRSQ9NQ92 184 aa18.31■□□□□ 0.52
SMPD4-216ENST00000461187 GNL3LQ9NVN8 582 aaKnown RBP18.31■□□□□ 0.52
SMPD4-216ENST00000461187 HDAC5Q9UQL6 1122 aa18.31■□□□□ 0.52
SMPD4-216ENST00000461187 MYO5AQ9Y4I1 1855 aaKnown RBP18.31■□□□□ 0.52
SMPD4-216ENST00000461187 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 SALL1Q9NSC2 1324 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 IRF6O14896 467 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 CETPP11597 493 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 PHKA1P46020 1223 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
SMPD4-216ENST00000461187 PPIL2Q13356 520 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 PRPF38BQ5VTL8 546 aaKnown RBP18.3■□□□□ 0.52
SMPD4-216ENST00000461187 MIGA2Q7L4E1 593 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 ZNF341Q9BYN7 854 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
SMPD4-216ENST00000461187 ATAD5Q96QE3 1844 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 BTBD19C9JJ37 291 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 SEMA3EO15041 775 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 ZBTB22O15209 634 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 LDHBP07195 334 aaKnown RBP18.29■□□□□ 0.52
SMPD4-216ENST00000461187 INPP5BP32019 993 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 TCP10Q12799 353 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 NFIAQ12857 509 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 ARMC5Q96C12 935 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
SMPD4-216ENST00000461187 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
SMPD4-216ENST00000461187 ADORA1P30542 326 aa18.28■□□□□ 0.52
SMPD4-216ENST00000461187 SNAPC2Q13487 334 aa18.28■□□□□ 0.52
SMPD4-216ENST00000461187 ARHGAP45Q92619 1136 aa18.28■□□□□ 0.52
SMPD4-216ENST00000461187 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
SMPD4-216ENST00000461187 FAM198AQ9UFP1 575 aa18.28■□□□□ 0.52
SMPD4-216ENST00000461187 ZNF112Q9UJU3 913 aa18.28■□□□□ 0.52
SMPD4-216ENST00000461187 TLR2O60603 784 aa18.27■□□□□ 0.52
SMPD4-216ENST00000461187 PPATQ06203 517 aa18.27■□□□□ 0.52
SMPD4-216ENST00000461187 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
SMPD4-216ENST00000461187 USP40Q9NVE5 1235 aa18.27■□□□□ 0.52
SMPD4-216ENST00000461187 TIMM10P62072 90 aa18.26■□□□□ 0.51
SMPD4-216ENST00000461187 WDHD1O75717 1129 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-216ENST00000461187 GNAI3P08754 354 aa18.25■□□□□ 0.51
SMPD4-216ENST00000461187 ARHGEF6Q15052 776 aa18.25■□□□□ 0.51
SMPD4-216ENST00000461187 ZFPM1Q8IX07 1006 aa18.25■□□□□ 0.51
SMPD4-216ENST00000461187 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
SMPD4-216ENST00000461187 PTCH2Q9Y6C5 1203 aa18.25■□□□□ 0.51
SMPD4-216ENST00000461187 GAKO14976 1311 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 SRGAP3O43295 1099 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 MTX1Q13505 466 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 RASGRF1Q13972 1273 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 NOL9Q5SY16 702 aaKnown RBP18.24■□□□□ 0.51
SMPD4-216ENST00000461187 ZGPATQ8N5A5 531 aaKnown RBP18.24■□□□□ 0.51
SMPD4-216ENST00000461187 ARHGAP39Q9C0H5 1083 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 KCNH4Q9UQ05 1017 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 RFX7Q2KHR2 1363 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 ATRNL1Q5VV63 1379 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 CEP290O15078 2479 aa18.24■□□□□ 0.51
SMPD4-216ENST00000461187 PDS5AQ29RF7 1337 aaKnown RBP18.23■□□□□ 0.51
SMPD4-216ENST00000461187 FOCADQ5VW36 1801 aa18.23■□□□□ 0.51
SMPD4-216ENST00000461187 A0A1B0GUL7 405 aa18.23■□□□□ 0.51
SMPD4-216ENST00000461187 LACTBP83111 547 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-216ENST00000461187 TFCP2Q12800 502 aa18.23■□□□□ 0.51
SMPD4-216ENST00000461187 XAGE2Q96GT9 111 aa18.23■□□□□ 0.51
SMPD4-216ENST00000461187 ZNF333Q96JL9 665 aa18.23■□□□□ 0.51
SMPD4-216ENST00000461187 IDI2Q9BXS1 227 aa18.23■□□□□ 0.51
SMPD4-216ENST00000461187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-216ENST00000461187 EN2P19622 333 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-216ENST00000461187 RGS3P49796 1198 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 MOGSQ13724 837 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 C17orf99Q6UX52 265 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 ANKRD23Q86SG2 305 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 FAM163AQ96GL9 167 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-216ENST00000461187 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 AKAP2Q9Y2D5 859 aa18.22■□□□□ 0.51
SMPD4-216ENST00000461187 PHF20L1A8MW92 1017 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 ENTPD3O75355 529 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 TRIM27P14373 513 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 KIF22Q14807 665 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 NBPF11Q86T75 865 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 DZIP1Q86YF9 867 aaKnown RBP18.21■□□□□ 0.51
SMPD4-216ENST00000461187 TNNQ9UQP3 1299 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 ADGRA2Q96PE1 1338 aa18.21■□□□□ 0.51
SMPD4-216ENST00000461187 PDHXO00330 501 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms