RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL9A2-205ENST00000461118 PANK1Q8TE04 598 aa22.79■■□□□ 1.24
COL9A2-205ENST00000461118 TBC1D22AQ8WUA7 517 aa22.79■■□□□ 1.24
COL9A2-205ENST00000461118 TMEM39BQ9GZU3 492 aa22.79■■□□□ 1.24
COL9A2-205ENST00000461118 MYH13Q9UKX3 1938 aa22.78■■□□□ 1.24
COL9A2-205ENST00000461118 ZBTB22O15209 634 aa22.78■■□□□ 1.24
COL9A2-205ENST00000461118 VGLL4Q14135 290 aa22.78■■□□□ 1.24
COL9A2-205ENST00000461118 HABP4Q5JVS0 413 aaKnown RBP22.78■■□□□ 1.24
COL9A2-205ENST00000461118 SSH3Q8TE77 659 aa22.78■■□□□ 1.24
COL9A2-205ENST00000461118 GCC1Q96CN9 775 aa22.78■■□□□ 1.24
COL9A2-205ENST00000461118 IQSEC3Q9UPP2 1182 aaPredicted RBP22.78■■□□□ 1.24
COL9A2-205ENST00000461118 FRAT2O75474 233 aaPredicted RBP22.77■■□□□ 1.24
COL9A2-205ENST00000461118 CRKP46108 304 aa22.77■■□□□ 1.24
COL9A2-205ENST00000461118 TCP10L2B9ZVM9 353 aa22.76■■□□□ 1.23
COL9A2-205ENST00000461118 FAM43AQ8N2R8 423 aa22.76■■□□□ 1.23
COL9A2-205ENST00000461118 ZNF333Q96JL9 665 aa22.76■■□□□ 1.23
COL9A2-205ENST00000461118 AKAP2Q9Y2D5 859 aa22.76■■□□□ 1.23
COL9A2-205ENST00000461118 MAP3K9P80192 1104 aa22.75■■□□□ 1.23
COL9A2-205ENST00000461118 TFCP2Q12800 502 aa22.75■■□□□ 1.23
COL9A2-205ENST00000461118 CCL15-CCL14A0A0B4J2E2 113 aa22.74■■□□□ 1.23
COL9A2-205ENST00000461118 CHAF1AQ13111 956 aaPredicted RBP22.74■■□□□ 1.23
COL9A2-205ENST00000461118 G3BP1Q13283 466 aaKnown RBP eCLIP22.74■■□□□ 1.23
COL9A2-205ENST00000461118 CCL15Q16663 113 aa22.74■■□□□ 1.23
COL9A2-205ENST00000461118 MRIQ9BWK5 157 aa22.74■■□□□ 1.23
COL9A2-205ENST00000461118 C1orf115Q9H7X2 142 aa22.74■■□□□ 1.23
COL9A2-205ENST00000461118 GNL3LQ9NVN8 582 aaKnown RBP22.74■■□□□ 1.23
COL9A2-205ENST00000461118 SUGT1Q9Y2Z0 365 aa22.74■■□□□ 1.23
COL9A2-205ENST00000461118 SEMA3EO15041 775 aa22.73■■□□□ 1.23
COL9A2-205ENST00000461118 GTF2A2P52657 109 aa22.73■■□□□ 1.23
COL9A2-205ENST00000461118 TIMM10P62072 90 aa22.73■■□□□ 1.23
COL9A2-205ENST00000461118 HDLBPQ00341 1268 aaKnown RBP22.73■■□□□ 1.23
COL9A2-205ENST00000461118 MVPQ14764 893 aaKnown RBP22.73■■□□□ 1.23
COL9A2-205ENST00000461118 TAF1CQ15572 869 aaPredicted RBP22.73■■□□□ 1.23
COL9A2-205ENST00000461118 WDR66Q8TBY9 1149 aa22.73■■□□□ 1.23
COL9A2-205ENST00000461118 PTCH2Q9Y6C5 1203 aa22.73■■□□□ 1.23
COL9A2-205ENST00000461118 SNCAIPQ9Y6H5 919 aa22.73■■□□□ 1.23
COL9A2-205ENST00000461118 A0A1B0GUL7 405 aa22.72■■□□□ 1.23
COL9A2-205ENST00000461118 SPDYE5A6NIY4 337 aa22.72■■□□□ 1.23
COL9A2-205ENST00000461118 CACNB3P54284 484 aa22.72■■□□□ 1.23
COL9A2-205ENST00000461118 OTUD5Q96G74 571 aa22.72■■□□□ 1.23
COL9A2-205ENST00000461118 DDX19BQ9UMR2 479 aa22.72■■□□□ 1.23
COL9A2-205ENST00000461118 ADORA1P30542 326 aa22.71■■□□□ 1.23
COL9A2-205ENST00000461118 PHKA1P46020 1223 aa22.71■■□□□ 1.23
COL9A2-205ENST00000461118 TNNI2P48788 182 aa22.71■■□□□ 1.23
COL9A2-205ENST00000461118 PDE3AQ14432 1141 aa22.71■■□□□ 1.23
COL9A2-205ENST00000461118 CCDC102BQ68D86 513 aa22.71■■□□□ 1.23
COL9A2-205ENST00000461118 ZFYVE28Q9HCC9 887 aa22.71■■□□□ 1.23
COL9A2-205ENST00000461118 NOP58Q9Y2X3 529 aaKnown RBP22.71■■□□□ 1.23
COL9A2-205ENST00000461118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.71■■□□□ 1.23
COL9A2-205ENST00000461118 CEP85Q6P2H3 762 aa22.7■■□□□ 1.22
COL9A2-205ENST00000461118 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.7■■□□□ 1.22
COL9A2-205ENST00000461118 XAGE2Q96GT9 111 aa22.7■■□□□ 1.22
COL9A2-205ENST00000461118 ARHGAP39Q9C0H5 1083 aa22.7■■□□□ 1.22
COL9A2-205ENST00000461118 DENND2AQ9ULE3 1009 aa22.7■■□□□ 1.22
COL9A2-205ENST00000461118 COG6Q9Y2V7 657 aa22.7■■□□□ 1.22
COL9A2-205ENST00000461118 APOBEC3HQ6NTF7 200 aaKnown RBP22.69■■□□□ 1.22
COL9A2-205ENST00000461118 ZDHHC15Q96MV8 337 aa22.69■■□□□ 1.22
COL9A2-205ENST00000461118 GPR108Q9NPR9 543 aa22.69■■□□□ 1.22
COL9A2-205ENST00000461118 ZBTB40Q9NUA8 1239 aa22.69■■□□□ 1.22
COL9A2-205ENST00000461118 CSADQ9Y600 493 aa22.69■■□□□ 1.22
COL9A2-205ENST00000461118 CEP290O15078 2479 aa22.69■■□□□ 1.22
COL9A2-205ENST00000461118 MAST3O60307 1309 aa22.68■■□□□ 1.22
COL9A2-205ENST00000461118 SALL1Q9NSC2 1324 aa22.68■■□□□ 1.22
COL9A2-205ENST00000461118 TLR2O60603 784 aa22.68■■□□□ 1.22
COL9A2-205ENST00000461118 SURF6O75683 361 aaKnown RBP22.68■■□□□ 1.22
COL9A2-205ENST00000461118 ZKSCAN4Q969J2 545 aaPredicted RBP22.68■■□□□ 1.22
COL9A2-205ENST00000461118 CHMP4BQ9H444 224 aaKnown RBP22.68■■□□□ 1.22
COL9A2-205ENST00000461118 AK9Q5TCS8 1911 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 MGAMO43451 1857 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 PDS5AQ29RF7 1337 aaKnown RBP22.67■■□□□ 1.22
COL9A2-205ENST00000461118 BTBD19C9JJ37 291 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 IRF6O14896 467 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 FXR1P51114 621 aaKnown RBP eCLIP22.67■■□□□ 1.22
COL9A2-205ENST00000461118 SLC9C1Q4G0N8 1177 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 FAM83AQ86UY5 434 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 ERO1BQ86YB8 467 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 TEKT1Q969V4 418 aa22.67■■□□□ 1.22
COL9A2-205ENST00000461118 RPAP1Q9BWH6 1393 aaPredicted RBP22.66■■□□□ 1.22
COL9A2-205ENST00000461118 FKBP1CQ5VVH2 108 aa22.66■■□□□ 1.22
COL9A2-205ENST00000461118 HHIPL2Q6UWX4 724 aa22.66■■□□□ 1.22
COL9A2-205ENST00000461118 NEUROD6Q96NK8 337 aa22.66■■□□□ 1.22
COL9A2-205ENST00000461118 WRNIP1Q96S55 665 aa22.66■■□□□ 1.22
COL9A2-205ENST00000461118 TMEM106CQ9BVX2 250 aa22.66■■□□□ 1.22
COL9A2-205ENST00000461118 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
COL9A2-205ENST00000461118 CETPP11597 493 aa22.65■■□□□ 1.22
COL9A2-205ENST00000461118 CTGFP29279 349 aa22.65■■□□□ 1.22
COL9A2-205ENST00000461118 LACTBP83111 547 aaPredicted RBP22.65■■□□□ 1.22
COL9A2-205ENST00000461118 RASGRF1Q13972 1273 aa22.65■■□□□ 1.22
COL9A2-205ENST00000461118 RPAP2Q8IXW5 612 aaPredicted RBP22.65■■□□□ 1.22
COL9A2-205ENST00000461118 OS9Q13438 667 aaPredicted RBP22.64■■□□□ 1.21
COL9A2-205ENST00000461118 ARHGEF6Q15052 776 aa22.64■■□□□ 1.21
COL9A2-205ENST00000461118 NBPF11Q86T75 865 aa22.64■■□□□ 1.21
COL9A2-205ENST00000461118 SH3TC2Q8TF17 1288 aa22.64■■□□□ 1.21
COL9A2-205ENST00000461118 PPIL2Q13356 520 aa22.63■■□□□ 1.21
COL9A2-205ENST00000461118 TNNI3KQ59H18 835 aa22.63■■□□□ 1.21
COL9A2-205ENST00000461118 C20orf194Q5TEA3 1177 aa22.63■■□□□ 1.21
COL9A2-205ENST00000461118 ZGPATQ8N5A5 531 aaKnown RBP22.63■■□□□ 1.21
COL9A2-205ENST00000461118 FPGT-TNNI3KV9GXZ4 949 aa22.63■■□□□ 1.21
COL9A2-205ENST00000461118 ADGRA2Q96PE1 1338 aa22.62■■□□□ 1.21
COL9A2-205ENST00000461118 LDHBP07195 334 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms