RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
DDR1-241ENST00000460944 CENPBP07199 599 aaPredicted RBP22.38■■□□□ 1.17
DDR1-241ENST00000460944 CACNB3P54284 484 aa22.38■■□□□ 1.17
DDR1-241ENST00000460944 MAP3K12Q12852 859 aa22.38■■□□□ 1.17
DDR1-241ENST00000460944 CDC42EP5Q6NZY7 148 aa22.38■■□□□ 1.17
DDR1-241ENST00000460944 MKRN1Q9UHC7 482 aaKnown RBP22.38■■□□□ 1.17
DDR1-241ENST00000460944 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 CEP350Q5VT06 3117 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 GOLIM4O00461 696 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 FKBP1BP68106 108 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 TTLL12Q14166 644 aaPredicted RBP22.37■■□□□ 1.17
DDR1-241ENST00000460944 DEFB115Q30KQ5 88 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 SUPT20HL1Q3ZLR7 823 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 PAXIP1Q6ZW49 1069 aaPredicted RBP22.37■■□□□ 1.17
DDR1-241ENST00000460944 ZNF384Q8TF68 577 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 ANTXR1Q9H6X2 564 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 CNTNAP1P78357 1384 aa22.37■■□□□ 1.17
DDR1-241ENST00000460944 GPR75-ASB3A0A0A6YYF3 556 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 RASSF10A6NK89 507 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 HUNKP57058 714 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 TMED8Q6PL24 325 aaPredicted RBP22.36■■□□□ 1.17
DDR1-241ENST00000460944 SAPCD2Q86UD0 394 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 FAM83AQ86UY5 434 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 SMC5Q8IY18 1101 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 KLRG1Q96E93 195 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 HAUS7Q99871 368 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 PAG1Q9NWQ8 432 aa22.36■■□□□ 1.17
DDR1-241ENST00000460944 TTC41PQ6P2S7 1318 aa22.35■■□□□ 1.17
DDR1-241ENST00000460944 BAG3O95817 575 aa22.35■■□□□ 1.17
DDR1-241ENST00000460944 IGHDP01880 384 aa22.35■■□□□ 1.17
DDR1-241ENST00000460944 ERC2O15083 957 aa22.34■■□□□ 1.17
DDR1-241ENST00000460944 MAP4K4O95819 1239 aaPredicted RBP22.34■■□□□ 1.17
DDR1-241ENST00000460944 ARMC9Q7Z3E5 817 aa22.34■■□□□ 1.17
DDR1-241ENST00000460944 TMEM39BQ9GZU3 492 aa22.34■■□□□ 1.17
DDR1-241ENST00000460944 MYH7P12883 1935 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 PPP1R12BO60237 982 aaPredicted RBP22.33■■□□□ 1.17
DDR1-241ENST00000460944 MX1P20591 662 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 CYP7A1P22680 504 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 NBPF12Q5TAG4 269 aaPredicted RBP22.33■■□□□ 1.17
DDR1-241ENST00000460944 B4GALNT3Q6L9W6 998 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 DNAJC5GQ8N7S2 189 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 MAGEB6Q8N7X4 407 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 HHIPL1Q96JK4 782 aa22.33■■□□□ 1.17
DDR1-241ENST00000460944 RPAP1Q9BWH6 1393 aaPredicted RBP22.33■■□□□ 1.17
DDR1-241ENST00000460944 PLCG2P16885 1265 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 ECE1P42892 770 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 PRKG1Q13976 671 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 TSHZ3Q63HK5 1081 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 FAM151AQ8WW52 585 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 HOOK2Q96ED9 719 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 IDI2Q9BXS1 227 aa22.32■■□□□ 1.16
DDR1-241ENST00000460944 GLRX3O76003 335 aaKnown RBP22.31■■□□□ 1.16
DDR1-241ENST00000460944 RHBDL3P58872 404 aa22.31■■□□□ 1.16
DDR1-241ENST00000460944 TCP10Q12799 353 aa22.31■■□□□ 1.16
DDR1-241ENST00000460944 NFIAQ12857 509 aa22.31■■□□□ 1.16
DDR1-241ENST00000460944 OTUD7AQ8TE49 926 aaPredicted RBP22.31■■□□□ 1.16
DDR1-241ENST00000460944 EDC3Q96F86 508 aaKnown RBP22.31■■□□□ 1.16
DDR1-241ENST00000460944 TEPSINQ96N21 525 aa22.31■■□□□ 1.16
DDR1-241ENST00000460944 LNPKQ9C0E8 428 aa22.31■■□□□ 1.16
DDR1-241ENST00000460944 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.31■■□□□ 1.161e-7■■■■□ 26.5
DDR1-241ENST00000460944 AATFQ9NY61 560 aaKnown RBP eCLIP22.31■■□□□ 1.16
DDR1-241ENST00000460944 ANGEL1Q9UNK9 670 aaKnown RBP22.31■■□□□ 1.16
DDR1-241ENST00000460944 SSC5DA1L4H1 1573 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 RFX7Q2KHR2 1363 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 ENTPD3O75355 529 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 NEFLP07196 543 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 RGS3P49796 1198 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 GRM1Q13255 1194 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 SLC9C2Q5TAH2 1124 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 CERS3Q8IU89 383 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 TEX11Q8IYF3 940 aa22.3■■□□□ 1.16
DDR1-241ENST00000460944 WDHD1O75717 1129 aaPredicted RBP22.29■■□□□ 1.16
DDR1-241ENST00000460944 PDE6AP16499 860 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 VEGFBP49765 207 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 PPP4CP60510 307 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 PICALMQ13492 652 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 CYP4F22Q6NT55 531 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 RGMBQ6NW40 437 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 MOB2Q70IA6 237 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 ADGRA1Q86SQ6 560 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 CHD1LQ86WJ1 897 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 CAPNS2Q96L46 248 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 FAM198AQ9UFP1 575 aa22.29■■□□□ 1.16
DDR1-241ENST00000460944 UBE2Q2LH0YL09 131 aa22.28■■□□□ 1.16
DDR1-241ENST00000460944 IREB2P48200 963 aaKnown RBP22.28■■□□□ 1.16
DDR1-241ENST00000460944 NUCB1Q02818 461 aa22.28■■□□□ 1.16
DDR1-241ENST00000460944 ZSCAN25Q6NSZ9 544 aa22.28■■□□□ 1.16
DDR1-241ENST00000460944 ZSCAN29Q8IWY8 852 aaPredicted RBP22.28■■□□□ 1.16
DDR1-241ENST00000460944 CDAN1Q8IWY9 1227 aa22.28■■□□□ 1.16
DDR1-241ENST00000460944 SH3RF3Q8TEJ3 882 aaPredicted RBP22.28■■□□□ 1.16
DDR1-241ENST00000460944 WDR33Q9C0J8 1336 aaKnown RBP22.28■■□□□ 1.16
DDR1-241ENST00000460944 ZNF157P51786 506 aaPredicted RBP22.27■■□□□ 1.16
DDR1-241ENST00000460944 DCAF15Q66K64 600 aa22.27■■□□□ 1.16
DDR1-241ENST00000460944 MIGA1Q8NAN2 632 aa22.27■■□□□ 1.16
DDR1-241ENST00000460944 PI4K2BQ8TCG2 481 aa22.27■■□□□ 1.16
DDR1-241ENST00000460944 CDK5RAP2Q96SN8 1893 aa22.27■■□□□ 1.16
DDR1-241ENST00000460944 SALL3Q9BXA9 1300 aa22.27■■□□□ 1.16
DDR1-241ENST00000460944 ZNF532Q9HCE3 1301 aa22.27■■□□□ 1.16
DDR1-241ENST00000460944 NPM3O75607 178 aaKnown RBP22.26■■□□□ 1.15
DDR1-241ENST00000460944 MAP3K11Q16584 847 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms