RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 TBC1D9Q6ZT07 1266 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 MICALL2Q8IY33 904 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 MAGEB6Q8N7X4 407 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 MTMR14Q8NCE2 650 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 NSUN4Q96CB9 384 aaKnown RBP13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 GMLQ99445 158 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 MYOZ2Q9NPC6 264 aa13.27□□□□□ -0.29
SMNDC1-203ENST00000460483 GNAT2P19087 354 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 SDSP20132 328 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 CRKP46108 304 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 TNNI2P48788 182 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 APPBP2Q92624 585 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 HELLSQ9NRZ9 838 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 PCDHB13Q9Y5F0 798 aa13.26□□□□□ -0.29
SMNDC1-203ENST00000460483 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 PDE6AP16499 860 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 EPHX2P34913 555 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 ADD2P35612 726 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 NUBP1P53384 320 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 AMOTL1Q8IY63 956 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 ANTXR1Q9H6X2 564 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
SMNDC1-203ENST00000460483 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 ZNF532Q9HCE3 1301 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 GPR75-ASB3A0A0A6YYF3 556 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 MAGEB6P1A0A0J9YX57 407 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 CDC45O75419 566 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 SCNN1DP51172 638 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 PPP4CP60510 307 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 HOOK2Q96ED9 719 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 CRNKL1Q9BZJ0 848 aaKnown RBP13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
SMNDC1-203ENST00000460483 GAKO14976 1311 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 RAD50Q92878 1312 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 YY1P25490 414 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 MCMDC2Q4G0Z9 681 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 FKBP1CQ5VVH2 108 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 APOBEC3FQ8IUX4 373 aaKnown RBP13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 MXD3Q9BW11 206 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
SMNDC1-203ENST00000460483 RPAP1Q9BWH6 1393 aaPredicted RBP13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 POTEMA6NI47 508 aa13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 SEC24BO95487 1268 aa13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 GSPT1P15170 499 aaKnown RBP13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 BTDP43251 543 aa13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 EDC3Q96F86 508 aaKnown RBP13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 USP40Q9NVE5 1235 aa13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 DAGLAQ9Y4D2 1042 aa13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
SMNDC1-203ENST00000460483 PITPNM2Q9BZ72 1349 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 WNT10BO00744 389 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 EPS15P42566 896 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 DIXDC1Q155Q3 683 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 RRAGCQ9HB90 399 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.29
SMNDC1-203ENST00000460483 COL4A5P29400 1685 aa13.21□□□□□ -0.3
SMNDC1-203ENST00000460483 REC8O95072 547 aa13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 USP5P45974 858 aa13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 APOBEC3HQ6NTF7 200 aaKnown RBP13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 SAMD7Q7Z3H4 446 aa13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 LDHDQ86WU2 507 aa13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
SMNDC1-203ENST00000460483 TCRBV5S4A2TA0A5A2 114 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 ENTPD3O75355 529 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 APPP05067 770 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 CHMLP26374 656 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 POTEGQ6S5H5 508 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 FAM83AQ86UY5 434 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
SMNDC1-203ENST00000460483 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms