RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MS4A4AQ96JQ5 239 aa28.23■■■□□ 2.11
PTPN4-207ENST00000460162 WRNIP1Q96S55 665 aa28.23■■■□□ 2.11
PTPN4-207ENST00000460162 AKAP2Q9Y2D5 859 aa28.23■■■□□ 2.11
PTPN4-207ENST00000460162 A0A1B0GUL7 405 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 GTF2A2P52657 109 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 CRHR2Q13324 411 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 FAM151AQ8WW52 585 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 CNKSR2Q8WXI2 1034 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 PTPN18Q99952 460 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 TNNQ9UQP3 1299 aa28.22■■■□□ 2.11
PTPN4-207ENST00000460162 SOX10P56693 466 aa28.21■■■□□ 2.11
PTPN4-207ENST00000460162 HNRNPUQ00839 825 aaKnown RBP eCLIP28.21■■■□□ 2.11
PTPN4-207ENST00000460162 RASGRF1Q13972 1273 aa28.21■■■□□ 2.11
PTPN4-207ENST00000460162 CDC42EP5Q6NZY7 148 aa28.21■■■□□ 2.11
PTPN4-207ENST00000460162 OTUD5Q96G74 571 aa28.21■■■□□ 2.11
PTPN4-207ENST00000460162 SNCAIPQ9Y6H5 919 aa28.21■■■□□ 2.11
PTPN4-207ENST00000460162 AK9Q5TCS8 1911 aa28.21■■■□□ 2.11
PTPN4-207ENST00000460162 TFCP2Q12800 502 aa28.2■■■□□ 2.1
PTPN4-207ENST00000460162 MVPQ14764 893 aaKnown RBP28.2■■■□□ 2.1
PTPN4-207ENST00000460162 ZKSCAN2Q63HK3 967 aa28.2■■■□□ 2.1
PTPN4-207ENST00000460162 CLUAP1Q96AJ1 413 aa28.2■■■□□ 2.1
PTPN4-207ENST00000460162 CCL15-CCL14A0A0B4J2E2 113 aa28.19■■■□□ 2.1
PTPN4-207ENST00000460162 CCL15Q16663 113 aa28.19■■■□□ 2.1
PTPN4-207ENST00000460162 ERO1BQ86YB8 467 aa28.19■■■□□ 2.1
PTPN4-207ENST00000460162 BRI3BPQ8WY22 251 aa28.19■■■□□ 2.1
PTPN4-207ENST00000460162 ERO1AQ96HE7 468 aa28.19■■■□□ 2.1
PTPN4-207ENST00000460162 ZNF341Q9BYN7 854 aa28.19■■■□□ 2.1
PTPN4-207ENST00000460162 GAKO14976 1311 aa28.18■■■□□ 2.1
PTPN4-207ENST00000460162 TIMM10P62072 90 aa28.18■■■□□ 2.1
PTPN4-207ENST00000460162 MIER1Q8N108 512 aa28.18■■■□□ 2.1
PTPN4-207ENST00000460162 XAGE2Q96GT9 111 aa28.18■■■□□ 2.1
PTPN4-207ENST00000460162 RFX7Q2KHR2 1363 aa28.17■■■□□ 2.1
PTPN4-207ENST00000460162 NFIAQ12857 509 aa28.17■■■□□ 2.1
PTPN4-207ENST00000460162 TNRC18O15417 2968 aaPredicted RBP28.17■■■□□ 2.1
PTPN4-207ENST00000460162 HTTP42858 3142 aa28.16■■■□□ 2.1
PTPN4-207ENST00000460162 TCP10Q12799 353 aa28.16■■■□□ 2.1
PTPN4-207ENST00000460162 DIEXFQ68CQ4 756 aaKnown RBP28.16■■■□□ 2.1
PTPN4-207ENST00000460162 DZIP1Q86YF9 867 aaKnown RBP28.16■■■□□ 2.1
PTPN4-207ENST00000460162 SLF2Q8IX21 1173 aa28.16■■■□□ 2.1
PTPN4-207ENST00000460162 TMEM57Q8N5G2 664 aa28.16■■■□□ 2.1
PTPN4-207ENST00000460162 ZKSCAN4Q969J2 545 aaPredicted RBP28.16■■■□□ 2.1
PTPN4-207ENST00000460162 USP40Q9NVE5 1235 aa28.16■■■□□ 2.1
PTPN4-207ENST00000460162 TRIM17Q9Y577 477 aa28.16■■■□□ 2.1
PTPN4-207ENST00000460162 PNMA6EA0A0J9YXQ4 647 aa28.15■■■□□ 2.1
PTPN4-207ENST00000460162 PPIL2Q13356 520 aa28.15■■■□□ 2.1
PTPN4-207ENST00000460162 SPTY2D1Q68D10 685 aaPredicted RBP28.15■■■□□ 2.1
PTPN4-207ENST00000460162 OTOP1Q7RTM1 612 aa28.15■■■□□ 2.1
PTPN4-207ENST00000460162 FAM198AQ9UFP1 575 aa28.15■■■□□ 2.1
PTPN4-207ENST00000460162 CETPP11597 493 aa28.14■■■□□ 2.1
PTPN4-207ENST00000460162 TAF1CQ15572 869 aaPredicted RBP28.14■■■□□ 2.1
PTPN4-207ENST00000460162 ZCCHC17Q9NP64 241 aaKnown RBP28.14■■■□□ 2.1
PTPN4-207ENST00000460162 ABCF2Q9UG63 623 aa28.14■■■□□ 2.1
PTPN4-207ENST00000460162 SP3Q02447 781 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 SNAPC2Q13487 334 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 MIGA2Q7L4E1 593 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 FAM43AQ8N2R8 423 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 IDI2Q9BXS1 227 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 ZFYVE28Q9HCC9 887 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 ZNF112Q9UJU3 913 aa28.13■■■□□ 2.09
PTPN4-207ENST00000460162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.13■■■□□ 2.09
PTPN4-207ENST00000460162 MAST2Q6P0Q8 1798 aa28.12■■■□□ 2.09
PTPN4-207ENST00000460162 IRF6O14896 467 aa28.12■■■□□ 2.09
PTPN4-207ENST00000460162 PPATQ06203 517 aa28.12■■■□□ 2.09
PTPN4-207ENST00000460162 G3BP1Q13283 466 aaKnown RBP eCLIP28.12■■■□□ 2.09
PTPN4-207ENST00000460162 CD99L2Q8TCZ2 262 aa28.12■■■□□ 2.09
PTPN4-207ENST00000460162 FAM163AQ96GL9 167 aaPredicted RBP28.12■■■□□ 2.09
PTPN4-207ENST00000460162 NEUROD6Q96NK8 337 aa28.12■■■□□ 2.09
PTPN4-207ENST00000460162 ATRNL1Q5VV63 1379 aa28.11■■■□□ 2.09
PTPN4-207ENST00000460162 ENTPD3O75355 529 aa28.11■■■□□ 2.09
PTPN4-207ENST00000460162 WDHD1O75717 1129 aaPredicted RBP28.11■■■□□ 2.09
PTPN4-207ENST00000460162 INPP5BP32019 993 aa28.11■■■□□ 2.09
PTPN4-207ENST00000460162 FTSJ3Q8IY81 847 aaKnown RBP28.11■■■□□ 2.09
PTPN4-207ENST00000460162 MROH7-TTC4A0A0A0MT08 1334 aa28.11■■■□□ 2.09
PTPN4-207ENST00000460162 RBBP6Q7Z6E9 1792 aaKnown RBP28.1■■■□□ 2.09
PTPN4-207ENST00000460162 ARID4AP29374 1257 aaPredicted RBP28.1■■■□□ 2.09
PTPN4-207ENST00000460162 NOL9Q5SY16 702 aaKnown RBP28.1■■■□□ 2.09
PTPN4-207ENST00000460162 GORABQ5T7V8 394 aa28.1■■■□□ 2.09
PTPN4-207ENST00000460162 ZBED9Q6R2W3 1325 aa28.1■■■□□ 2.09
PTPN4-207ENST00000460162 PDE4DIPQ5VU43 2346 aa28.09■■■□□ 2.09
PTPN4-207ENST00000460162 RGS3P49796 1198 aa28.09■■■□□ 2.09
PTPN4-207ENST00000460162 POLA2Q14181 598 aa28.09■■■□□ 2.09
PTPN4-207ENST00000460162 ERICH6Q7L0X2 663 aa28.09■■■□□ 2.09
PTPN4-207ENST00000460162 HMG20BQ9P0W2 317 aa28.09■■■□□ 2.09
PTPN4-207ENST00000460162 BTDP43251 543 aa28.08■■■□□ 2.09
PTPN4-207ENST00000460162 SPATA5Q8NB90 893 aa28.08■■■□□ 2.09
PTPN4-207ENST00000460162 EFCC1Q9HA90 598 aa28.08■■■□□ 2.09
PTPN4-207ENST00000460162 DOCK1Q14185 1865 aa28.08■■■□□ 2.09
PTPN4-207ENST00000460162 MECOMQ03112 1051 aa28.07■■■□□ 2.08
PTPN4-207ENST00000460162 PTPN22Q9Y2R2 807 aa28.07■■■□□ 2.08
PTPN4-207ENST00000460162 BTBD19C9JJ37 291 aa28.06■■■□□ 2.08
PTPN4-207ENST00000460162 ZFPM1Q8IX07 1006 aa28.06■■■□□ 2.08
PTPN4-207ENST00000460162 SSH3Q8TE77 659 aa28.06■■■□□ 2.08
PTPN4-207ENST00000460162 GPR108Q9NPR9 543 aa28.06■■■□□ 2.08
PTPN4-207ENST00000460162 KCNH4Q9UQ05 1017 aa28.06■■■□□ 2.08
PTPN4-207ENST00000460162 TLR2O60603 784 aa28.05■■■□□ 2.08
PTPN4-207ENST00000460162 UQCRFS1P1P0C7P4 283 aa28.05■■■□□ 2.08
PTPN4-207ENST00000460162 GSTO1P78417 241 aa28.05■■■□□ 2.08
PTPN4-207ENST00000460162 ARHGEF6Q15052 776 aa28.05■■■□□ 2.08
PTPN4-207ENST00000460162 PI16Q6UXB8 463 aa28.05■■■□□ 2.08
PTPN4-207ENST00000460162 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms