RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, human

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUCB1-208	ENST00000460125	INPP5B	P32019	993 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	FLT3LG	P49771	235 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	CALD1	Q05682	793 aa	Known RBP	13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	FKBP1C	Q5VVH2	108 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	DCAF15	Q66K64	600 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	G2E3	Q7L622	706 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	PARK7	Q99497	189 aa	Known RBP	13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	ZNF341	Q9BYN7	854 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	ADAMTS8	Q9UP79	889 aa		13.88	□□□□□ -0.19
NUCB1-208	ENST00000460125	ELN	P15502	786 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	GYG1	P46976	350 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	FOXO4	P98177	505 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	IRF5	Q13568	498 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	WDR43	Q15061	677 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	GPAT2	Q6NUI2	795 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	C7orf61	Q8IZ16	206 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	TDH	Q8IZJ6	230 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	FAM84B	Q96KN1	310 aa	Predicted RBP	13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	MYH16	Q9H6N6	1097 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	ZNF112	Q9UJU3	913 aa		13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.87	□□□□□ -0.19
NUCB1-208	ENST00000460125		A0A1B0GUL6	1792 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	CYP2C8	P10632	490 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	UBE4A	Q14139	1066 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	LDHAL6A	Q6ZMR3	332 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	MIGA2	Q7L4E1	593 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	DIS3L	Q8TF46	1054 aa	Known RBP	13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	MRI	Q9BWK5	157 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	STK31	Q9BXU1	1019 aa		13.86	□□□□□ -0.19
NUCB1-208	ENST00000460125	MAGEA10	P43363	369 aa	Predicted RBP	13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	ANKLE1	Q8NAG6	615 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	LINS1	Q8NG48	757 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	TEKT1	Q969V4	418 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	ZNF594	Q96JF6	807 aa	Predicted RBP	13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	ZDHHC15	Q96MV8	337 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	TMOD2	Q9NZR1	351 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	CHMP3	Q9Y3E7	222 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	ALPK3	Q96L96	1907 aa		13.85	□□□□□ -0.19
NUCB1-208	ENST00000460125	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.84	□□□□□ -0.19
NUCB1-208	ENST00000460125	CXCL11	O14625	94 aa		13.84	□□□□□ -0.19
NUCB1-208	ENST00000460125	SLC4A2	P04920	1241 aa		13.84	□□□□□ -0.19
NUCB1-208	ENST00000460125	CNNM1	Q9NRU3	951 aa		13.84	□□□□□ -0.19
NUCB1-208	ENST00000460125	SYN1	P17600	705 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	CCDC57	Q2TAC2	916 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	NOL9	Q5SY16	702 aa	Known RBP	13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	LMBR1L	Q6UX01	489 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	FBXO33	Q7Z6M2	555 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	TBC1D22A	Q8WUA7	517 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	DNAAF4	Q8WXU2	420 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	RPTOR	Q8N122	1335 aa		13.83	□□□□□ -0.2
NUCB1-208	ENST00000460125	MGAM	O43451	1857 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	APAF1	O14727	1248 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	TNPO2	O14787	897 aa	Known RBP	13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	FLII	Q13045	1269 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	TAF7L	Q5H9L4	462 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	EPHA10	Q5JZY3	1008 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	FAM151A	Q8WW52	585 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	UBE2O	Q9C0C9	1292 aa	Known RBP	13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	NBPF3	Q9H094	633 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	PRDM6	Q9NQX0	595 aa		13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.82	□□□□□ -0.2
NUCB1-208	ENST00000460125	POTEB2	H3BUK9	544 aa		13.81	□□□□□ -0.2
NUCB1-208	ENST00000460125	CHAF1A	Q13111	956 aa	Predicted RBP	13.81	□□□□□ -0.2
NUCB1-208	ENST00000460125	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.81	□□□□□ -0.2
NUCB1-208	ENST00000460125	FASTKD5	Q7L8L6	764 aa	Known RBP	13.81	□□□□□ -0.2
NUCB1-208	ENST00000460125	GUCD1	Q96NT3	240 aa		13.81	□□□□□ -0.2
NUCB1-208	ENST00000460125	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.81	□□□□□ -0.2
NUCB1-208	ENST00000460125	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125		A0A0G2JLL6	359 aa	Predicted RBP	13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125	HHIPL2	Q6UWX4	724 aa		13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125	C11orf49	Q9H6J7	331 aa		13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125	SLC45A1	Q9Y2W3	748 aa		13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125	VCAN	P13611	3396 aa		13.8	□□□□□ -0.2
NUCB1-208	ENST00000460125	FKBP5	Q13451	457 aa	Predicted RBP	13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	TWISTNB	Q3B726	338 aa	Predicted RBP	13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	DIEXF	Q68CQ4	756 aa	Known RBP	13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	VPS37D	Q86XT2	251 aa		13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	COA7	Q96BR5	231 aa		13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	PUS3	Q9BZE2	481 aa	Known RBP	13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	TAOK2	Q9UL54	1235 aa		13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	SUGT1	Q9Y2Z0	365 aa		13.79	□□□□□ -0.2
NUCB1-208	ENST00000460125	FRAT2	O75474	233 aa	Predicted RBP	13.78	□□□□□ -0.2
NUCB1-208	ENST00000460125	TSR2	Q969E8	191 aa	Known RBP	13.78	□□□□□ -0.2
NUCB1-208	ENST00000460125	ZHX2	Q9Y6X8	837 aa		13.78	□□□□□ -0.2
NUCB1-208	ENST00000460125	MAST3	O60307	1309 aa		13.78	□□□□□ -0.2
NUCB1-208	ENST00000460125	HMGCR	P04035	888 aa		13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	TCP10	Q12799	353 aa		13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	BEND3	Q5T5X7	828 aa		13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	GADL1	Q6ZQY3	521 aa		13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	HMX1	Q9NP08	348 aa	Predicted RBP	13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	OGDHL	Q9ULD0	1010 aa		13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	AFG3L2	Q9Y4W6	797 aa		13.77	□□□□□ -0.21
NUCB1-208	ENST00000460125	MROH5	Q6ZUA9	1318 aa		13.76	□□□□□ -0.21
NUCB1-208	ENST00000460125	PHF20L1	A8MW92	1017 aa		13.76	□□□□□ -0.21
NUCB1-208	ENST00000460125	PTPRA	P18433	802 aa		13.76	□□□□□ -0.21
NUCB1-208	ENST00000460125	NFIA	Q12857	509 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms