RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 WDHD1O75717 1129 aaPredicted RBP21.07■□□□□ 0.96
HPS3-202ENST00000460120 UQCRFS1P1P0C7P4 283 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 ARID4AP29374 1257 aaPredicted RBP21.07■□□□□ 0.96
HPS3-202ENST00000460120 TICAM2Q86XR7 235 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 VPS37DQ86XT2 251 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 NUTM2AQ8IVF1 878 aaPredicted RBP21.07■□□□□ 0.96
HPS3-202ENST00000460120 LCORLQ8N3X6 602 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 ZSWIM5Q9P217 1185 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 ABCF2Q9UG63 623 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 KDM4FA0A1W2PPD8 638 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 MAP3K12Q12852 859 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 KCNG4Q8TDN1 519 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 SPEF2Q9C093 1822 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 MROH7-TTC4A0A0A0MT08 1334 aa21.07■□□□□ 0.96
HPS3-202ENST00000460120 SMIM22K7EJ46 135 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 ATL3Q6DD88 541 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 FBXL16Q8N461 479 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 ZNF592Q92610 1267 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 CHMP4CQ96CF2 233 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 CLIC6Q96NY7 704 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 RIOK3O14730 519 aaKnown RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 RANBP6O60518 1105 aaKnown RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 ZNF202O95125 648 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 PFKFB1P16118 471 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 SPECC1Q5M775 1068 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 BICDL1Q6ZP65 573 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 LRP2BPQ9P2M1 347 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 SLC4A4Q9Y6R1 1079 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 MYO5AQ9Y4I1 1855 aaKnown RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 MROH5Q6ZUA9 1318 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 FGFR2P21802 821 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 CHAF1AQ13111 956 aaPredicted RBP21.06■□□□□ 0.96
HPS3-202ENST00000460120 LY9Q9HBG7 655 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 CCDC87Q9NVE4 849 aa21.06■□□□□ 0.96
HPS3-202ENST00000460120 STRCQ7RTU9 1775 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 ITGB4P16144 1822 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 ATP2B1P20020 1258 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
HPS3-202ENST00000460120 POLR3EQ9NVU0 708 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 SLC12A7Q9Y666 1083 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 SLIT2O94813 1529 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 CCDC69A6NI79 296 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 ITPK1Q13572 414 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 DDB1Q16531 1140 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 BRAPQ7Z569 592 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 IGDCC4Q8TDY8 1250 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 PRIMPOLQ96LW4 560 aa21.05■□□□□ 0.96
HPS3-202ENST00000460120 ABCC12Q96J65 1359 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 GUCY1A2P33402 732 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 KIAA1468Q9P260 1216 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 MINDY4BA8MYZ0 360 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 PATL2C9JE40 543 aaKnown RBP21.04■□□□□ 0.96
HPS3-202ENST00000460120 SMC2O95347 1197 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 SLC3A2P08195 630 aaKnown RBP21.04■□□□□ 0.96
HPS3-202ENST00000460120 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
HPS3-202ENST00000460120 TPD52L1Q16890 204 aaPredicted RBP21.04■□□□□ 0.96
HPS3-202ENST00000460120 CPLX2Q6PUV4 134 aaKnown RBP21.04■□□□□ 0.96
HPS3-202ENST00000460120 SDR42E1Q8WUS8 393 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 KCNJ14Q9UNX9 436 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 LRP6O75581 1613 aa21.04■□□□□ 0.96
HPS3-202ENST00000460120 YEATS4O95619 227 aa21.03■□□□□ 0.96
HPS3-202ENST00000460120 IGHMBP2P38935 993 aaKnown RBP21.03■□□□□ 0.96
HPS3-202ENST00000460120 TRIM29Q14134 588 aa21.03■□□□□ 0.96
HPS3-202ENST00000460120 TRMT1Q9NXH9 659 aaKnown RBP21.03■□□□□ 0.96
HPS3-202ENST00000460120 AKAP11Q9UKA4 1901 aa21.03■□□□□ 0.96
HPS3-202ENST00000460120 GSG1L2A8MUP6 293 aa21.03■□□□□ 0.96
HPS3-202ENST00000460120 ZNF512BQ96KM6 892 aaPredicted RBP21.03■□□□□ 0.96
HPS3-202ENST00000460120 LOC102724428A0A0B4J2F2 783 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 USP27XA6NNY8 438 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 KCNQ2O43526 872 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 GYG1P46976 350 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 SIK1P57059 783 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 PTPN21Q16825 1174 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 MFSD6Q6ZSS7 791 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.02■□□□□ 0.96
HPS3-202ENST00000460120 DISP2A7MBM2 1401 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 A0A1W2PQ27 194 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 A0A1W2PQ64 194 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 A0A1W2PQD8 194 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 CHRNDQ07001 517 aa21.02■□□□□ 0.96
HPS3-202ENST00000460120 AXDND1Q5T1B0 1012 aaPredicted RBP21.02■□□□□ 0.96
HPS3-202ENST00000460120 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.96
HPS3-202ENST00000460120 CDKL5O76039 1030 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 CCDC24Q8N4L8 307 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 NAT10Q9H0A0 1025 aaKnown RBP21.01■□□□□ 0.95
HPS3-202ENST00000460120 CAVIN2O95810 425 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 CCDC152Q4G0S7 254 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 ADGRA1Q86SQ6 560 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 LRRC8AQ8IWT6 810 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 ZNF710Q8N1W2 664 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 RAI14Q9P0K7 980 aa21.01■□□□□ 0.95
HPS3-202ENST00000460120 TNNT1P13805 278 aa21■□□□□ 0.95
HPS3-202ENST00000460120 MYH15Q9Y2K3 1946 aa21■□□□□ 0.95
HPS3-202ENST00000460120 hCG_1642624A0A1W2PR95 340 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms