RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 DAGLAQ9Y4D2 1042 aa19.18■□□□□ 0.66
SDF4-204ENST00000459994 A0A1B0GUL7 405 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 RASGRF1Q13972 1273 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 HHIPL2Q6UWX4 724 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.17■□□□□ 0.66
SDF4-204ENST00000459994 REM2Q8IYK8 340 aaPredicted RBP19.17■□□□□ 0.66
SDF4-204ENST00000459994 XAGE2Q96GT9 111 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 ELP3Q9H9T3 547 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 NOP58Q9Y2X3 529 aaKnown RBP19.17■□□□□ 0.66
SDF4-204ENST00000459994 SUGT1Q9Y2Z0 365 aa19.17■□□□□ 0.66
SDF4-204ENST00000459994 CDK5RAP2Q96SN8 1893 aa19.16■□□□□ 0.66
SDF4-204ENST00000459994 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
SDF4-204ENST00000459994 IREB2P48200 963 aaKnown RBP19.16■□□□□ 0.66
SDF4-204ENST00000459994 CCDC136Q96JN2 1154 aa19.16■□□□□ 0.66
SDF4-204ENST00000459994 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
SDF4-204ENST00000459994 MAST3O60307 1309 aa19.16■□□□□ 0.66
SDF4-204ENST00000459994 CCDC85CA6NKD9 419 aa19.15■□□□□ 0.66
SDF4-204ENST00000459994 IGHDP01880 384 aa19.15■□□□□ 0.66
SDF4-204ENST00000459994 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
SDF4-204ENST00000459994 PI16Q6UXB8 463 aa19.15■□□□□ 0.66
SDF4-204ENST00000459994 ZNF296Q8WUU4 475 aaPredicted RBP19.15■□□□□ 0.66
SDF4-204ENST00000459994 DENND2AQ9ULE3 1009 aa19.15■□□□□ 0.66
SDF4-204ENST00000459994 SALL1Q9NSC2 1324 aa19.15■□□□□ 0.66
SDF4-204ENST00000459994 ZSWIM8A7E2V4 1837 aa19.14■□□□□ 0.65
SDF4-204ENST00000459994 TNNI2P48788 182 aa19.14■□□□□ 0.65
SDF4-204ENST00000459994 NFIAQ12857 509 aa19.14■□□□□ 0.65
SDF4-204ENST00000459994 ANKRD13AQ8IZ07 590 aa19.14■□□□□ 0.65
SDF4-204ENST00000459994 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.14■□□□□ 0.653e-7■□□□□ 8.9
SDF4-204ENST00000459994 LDHBP07195 334 aaKnown RBP19.13■□□□□ 0.65
SDF4-204ENST00000459994 ZBTB48P10074 688 aaPredicted RBP19.13■□□□□ 0.65
SDF4-204ENST00000459994 SREBF2Q12772 1141 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 VGLL4Q14135 290 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 IFNL1Q8IU54 200 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 SMC5Q8IY18 1101 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 ZNF384Q8TF68 577 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 GCC1Q96CN9 775 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 OPTNQ96CV9 577 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 NEUROD6Q96NK8 337 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 PTPN18Q99952 460 aa19.13■□□□□ 0.65
SDF4-204ENST00000459994 GNL3LQ9NVN8 582 aaKnown RBP19.13■□□□□ 0.65
SDF4-204ENST00000459994 MAST2Q6P0Q8 1798 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 GPR25O00155 361 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 SEMA3EO15041 775 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
SDF4-204ENST00000459994 TCP10Q12799 353 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 B4GALNT3Q6L9W6 998 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 FAM83AQ86UY5 434 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 ZFPM1Q8IX07 1006 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 FAM198AQ9UFP1 575 aa19.12■□□□□ 0.65
SDF4-204ENST00000459994 RPAP1Q9BWH6 1393 aaPredicted RBP19.11■□□□□ 0.65
SDF4-204ENST00000459994 MANSC4A6NHS7 340 aaPredicted RBP19.11■□□□□ 0.65
SDF4-204ENST00000459994 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.65
SDF4-204ENST00000459994 CENPQQ7L2Z9 268 aaPredicted RBP19.11■□□□□ 0.65
SDF4-204ENST00000459994 MIGA2Q7L4E1 593 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 MS4A4AQ96JQ5 239 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 TMOD2Q9NZR1 351 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 AKAP2Q9Y2D5 859 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 SNCAIPQ9Y6H5 919 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
SDF4-204ENST00000459994 UNCXA6NJT0 531 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 ZBTB22O15209 634 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 MAP3K9P80192 1104 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 FKBP1CQ5VVH2 108 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 ZKSCAN4Q969J2 545 aaPredicted RBP19.1■□□□□ 0.65
SDF4-204ENST00000459994 CFHR5Q9BXR6 569 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 HMG20BQ9P0W2 317 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 ABCF2Q9UG63 623 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 PTPRFP10586 1907 aa19.1■□□□□ 0.65
SDF4-204ENST00000459994 FOCADQ5VW36 1801 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 RFX7Q2KHR2 1363 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 GAKO14976 1311 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 CAP1Q01518 475 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 TBC1D9Q6ZT07 1266 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 CTU1Q7Z7A3 348 aaKnown RBP19.09■□□□□ 0.65
SDF4-204ENST00000459994 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 USP40Q9NVE5 1235 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 SIPA1L1O43166 1804 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 ATAD5Q96QE3 1844 aa19.09■□□□□ 0.65
SDF4-204ENST00000459994 PDS5AQ29RF7 1337 aaKnown RBP19.08■□□□□ 0.65
SDF4-204ENST00000459994 DOCK1Q14185 1865 aa19.08■□□□□ 0.65
SDF4-204ENST00000459994 INPP5BP32019 993 aa19.08■□□□□ 0.64
SDF4-204ENST00000459994 MCAMP43121 646 aa19.08■□□□□ 0.64
SDF4-204ENST00000459994 FAM151AQ8WW52 585 aa19.08■□□□□ 0.64
SDF4-204ENST00000459994 OTUD5Q96G74 571 aa19.08■□□□□ 0.64
SDF4-204ENST00000459994 WRNIP1Q96S55 665 aa19.08■□□□□ 0.64
SDF4-204ENST00000459994 TESPA1A2RU30 521 aaPredicted RBP19.07■□□□□ 0.64
SDF4-204ENST00000459994 ARID4AP29374 1257 aaPredicted RBP19.07■□□□□ 0.64
SDF4-204ENST00000459994 SH3BP5LQ7L8J4 393 aa19.07■□□□□ 0.64
SDF4-204ENST00000459994 BRI3BPQ8WY22 251 aa19.07■□□□□ 0.64
SDF4-204ENST00000459994 DBNDD2Q9BQY9 259 aa19.07■□□□□ 0.64
SDF4-204ENST00000459994 DDX4Q9NQI0 724 aaKnown RBP19.07■□□□□ 0.64
SDF4-204ENST00000459994 ATRNL1Q5VV63 1379 aa19.06■□□□□ 0.64
SDF4-204ENST00000459994 MECOMQ03112 1051 aa19.06■□□□□ 0.64
SDF4-204ENST00000459994 CRHR2Q13324 411 aa19.06■□□□□ 0.64
SDF4-204ENST00000459994 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms